RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
LRP8-201ENST00000306052 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
LRP8-201ENST00000306052 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
LRP8-201ENST00000306052 MRPS36P82909 103 aaKnown RBP10.61□□□□□ -0.71
LRP8-201ENST00000306052 ABCA12Q86UK0 2595 aa10.61□□□□□ -0.71
LRP8-201ENST00000306052 PCOTHQ58A44 107 aa10.61□□□□□ -0.71
LRP8-201ENST00000306052 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
LRP8-201ENST00000306052 LINC00208Q96KT6 92 aa10.61□□□□□ -0.71
LRP8-201ENST00000306052 TRAV7A0A075B6U4 112 aa10.6□□□□□ -0.71
LRP8-201ENST00000306052 K7EQG2 157 aa10.6□□□□□ -0.71
LRP8-201ENST00000306052 BEAN1Q3B7T3 259 aa10.6□□□□□ -0.71
LRP8-201ENST00000306052 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
LRP8-201ENST00000306052 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
LRP8-201ENST00000306052 DEFB116Q30KQ4 102 aa10.59□□□□□ -0.71
LRP8-201ENST00000306052 C5orf42Q9H799 3197 aa10.59□□□□□ -0.71
LRP8-201ENST00000306052 MYO9AB2RTY4 2548 aa10.58□□□□□ -0.72
LRP8-201ENST00000306052 CD164L2Q6UWJ8 174 aa10.58□□□□□ -0.72
LRP8-201ENST00000306052 A0A087WYN8 130 aa10.58□□□□□ -0.72
LRP8-201ENST00000306052 A0A096LNJ9 63 aa10.58□□□□□ -0.72
LRP8-201ENST00000306052 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
LRP8-201ENST00000306052 LINC00959A0A1B0GUT2 108 aa10.57□□□□□ -0.72
LRP8-201ENST00000306052 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
LRP8-201ENST00000306052 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
LRP8-201ENST00000306052 TRBV6-4A0A1B0GX49 114 aa10.55□□□□□ -0.72
LRP8-201ENST00000306052 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
LRP8-201ENST00000306052 PRR3P79522 188 aaKnown RBP10.55□□□□□ -0.72
LRP8-201ENST00000306052 Q8N6K4 173 aa10.55□□□□□ -0.72
LRP8-201ENST00000306052 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
LRP8-201ENST00000306052 ZNF73O43830 326 aaPredicted RBP10.54□□□□□ -0.72
LRP8-201ENST00000306052 CRYGAP11844 174 aa10.54□□□□□ -0.72
LRP8-201ENST00000306052 SBSPONQ8IVN8 264 aa10.54□□□□□ -0.72
LRP8-201ENST00000306052 LELP1Q5T871 98 aa10.53□□□□□ -0.72
LRP8-201ENST00000306052 NUPR2A6NF83 97 aa10.52□□□□□ -0.72
LRP8-201ENST00000306052 COX6A2Q02221 97 aa10.52□□□□□ -0.72
LRP8-201ENST00000306052 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
LRP8-201ENST00000306052 PKD1L2Q7Z442 2459 aa10.51□□□□□ -0.73
LRP8-201ENST00000306052 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
LRP8-201ENST00000306052 REG3GQ6UW15 175 aa10.51□□□□□ -0.73
LRP8-201ENST00000306052 CYSRT1A8MQ03 144 aa10.51□□□□□ -0.73
LRP8-201ENST00000306052 USP9XQ93008 2570 aaPredicted RBP10.51□□□□□ -0.73
LRP8-201ENST00000306052 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 C4orf26Q17RF5 130 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 EPG5Q9HCE0 2579 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 IGLV5-52A0A0A0MRZ9 124 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 KLLNB2CW77 178 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 COX17Q14061 63 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
LRP8-201ENST00000306052 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 NTM-AS1Q6ZSK4 140 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 Q8N814 137 aa10.5□□□□□ -0.73
LRP8-201ENST00000306052 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
LRP8-201ENST00000306052 C6orf223Q8N319 242 aa10.49□□□□□ -0.73
LRP8-201ENST00000306052 RPL28P46779 137 aaKnown RBP10.48□□□□□ -0.73
LRP8-201ENST00000306052 H0Y9P7 68 aa10.47□□□□□ -0.73
LRP8-201ENST00000306052 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.47□□□□□ -0.73
LRP8-201ENST00000306052 Q9UF83 564 aa10.47□□□□□ -0.73
LRP8-201ENST00000306052 PRLHP81277 87 aa10.47□□□□□ -0.73
LRP8-201ENST00000306052 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
LRP8-201ENST00000306052 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.73
LRP8-201ENST00000306052 Q8N3U1 123 aa10.46□□□□□ -0.73
LRP8-201ENST00000306052 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.74
LRP8-201ENST00000306052 LINC00242Q5T6M2 205 aa10.46□□□□□ -0.74
LRP8-201ENST00000306052 TRBV7-7A0A0K0K1E9 115 aa10.45□□□□□ -0.74
LRP8-201ENST00000306052 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
LRP8-201ENST00000306052 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
LRP8-201ENST00000306052 LINC00846Q9NV44 126 aa10.45□□□□□ -0.74
LRP8-201ENST00000306052 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
LRP8-201ENST00000306052 DOPEY1Q5JWR5 2465 aa10.44□□□□□ -0.74
LRP8-201ENST00000306052 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
LRP8-201ENST00000306052 PRO0628Q9UI54 55 aa10.44□□□□□ -0.74
LRP8-201ENST00000306052 LINC00575Q6W349 94 aa10.44□□□□□ -0.74
LRP8-201ENST00000306052 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
LRP8-201ENST00000306052 Q9BRP9 147 aa10.43□□□□□ -0.74
LRP8-201ENST00000306052 BRI3O95415 125 aa10.43□□□□□ -0.74
LRP8-201ENST00000306052 EDN2P20800 178 aa10.42□□□□□ -0.74
LRP8-201ENST00000306052 C7orf65Q6ZTY9 151 aa10.42□□□□□ -0.74
LRP8-201ENST00000306052 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
LRP8-201ENST00000306052 PCSK5Q92824 1860 aa10.42□□□□□ -0.74
LRP8-201ENST00000306052 POLQO75417 2590 aa10.42□□□□□ -0.74
LRP8-201ENST00000306052 IGKV2D-30A0A075B6S6 120 aa10.41□□□□□ -0.74
LRP8-201ENST00000306052 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
LRP8-201ENST00000306052 Q8IZM0 81 aa10.41□□□□□ -0.74
LRP8-201ENST00000306052 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
LRP8-201ENST00000306052 CHD7Q9P2D1 2997 aa10.41□□□□□ -0.74
LRP8-201ENST00000306052 RANBP2P49792 3224 aaKnown RBP10.4□□□□□ -0.74
LRP8-201ENST00000306052 HTTP42858 3142 aa10.4□□□□□ -0.75
LRP8-201ENST00000306052 MRGPRG-AS1Q2M3A8 158 aa10.39□□□□□ -0.75
LRP8-201ENST00000306052 HCG22E2RYF7 251 aa10.39□□□□□ -0.75
LRP8-201ENST00000306052 A8MTW9 85 aa10.39□□□□□ -0.75
LRP8-201ENST00000306052 SERTAD4-AS1Q5TG53 156 aa10.38□□□□□ -0.75
LRP8-201ENST00000306052 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
LRP8-201ENST00000306052 LAMA3Q16787 3333 aa10.37□□□□□ -0.75
LRP8-201ENST00000306052 AMELXQ99217 191 aa10.37□□□□□ -0.75
LRP8-201ENST00000306052 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
LRP8-201ENST00000306052 A0A087WSZ3 146 aa10.36□□□□□ -0.75
LRP8-201ENST00000306052 C2orf48Q96LS8 159 aa10.35□□□□□ -0.75
LRP8-201ENST00000306052 IGLV1-51P01701 117 aa10.35□□□□□ -0.75
LRP8-201ENST00000306052 ACANP16112 2415 aa10.35□□□□□ -0.75
LRP8-201ENST00000306052 BRCA2P51587 3418 aa10.34□□□□□ -0.75
LRP8-201ENST00000306052 FSHBP01225 129 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms