RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
SHANK1-201ENST00000293441 TSPEAR-AS2P59090 65 aa12.27□□□□□ -0.45
SHANK1-201ENST00000293441 A0A087WYN8 130 aa12.27□□□□□ -0.45
SHANK1-201ENST00000293441 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
SHANK1-201ENST00000293441 MRPL55Q7Z7F7 128 aaKnown RBP12.26□□□□□ -0.45
SHANK1-201ENST00000293441 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
SHANK1-201ENST00000293441 IGHV6-1A0A0B4J1U7 121 aa12.26□□□□□ -0.45
SHANK1-201ENST00000293441 FHL3Q13643 280 aa12.26□□□□□ -0.45
SHANK1-201ENST00000293441 Q9BRP9 147 aa12.25□□□□□ -0.45
SHANK1-201ENST00000293441 FSHBP01225 129 aa12.25□□□□□ -0.45
SHANK1-201ENST00000293441 SERP2Q8N6R1 65 aa12.25□□□□□ -0.45
SHANK1-201ENST00000293441 NHLRC4P0CG21 123 aaPredicted RBP12.24□□□□□ -0.45
SHANK1-201ENST00000293441 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
SHANK1-201ENST00000293441 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
SHANK1-201ENST00000293441 AMELXQ99217 191 aa12.23□□□□□ -0.45
SHANK1-201ENST00000293441 NDUFC1O43677 76 aa12.23□□□□□ -0.45
SHANK1-201ENST00000293441 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
SHANK1-201ENST00000293441 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
SHANK1-201ENST00000293441 FAM240AA0A1B0GVK7 77 aa12.2□□□□□ -0.46
SHANK1-201ENST00000293441 Q6ZRU5 148 aa12.2□□□□□ -0.46
SHANK1-201ENST00000293441 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
SHANK1-201ENST00000293441 C2orf48Q96LS8 159 aa12.2□□□□□ -0.46
SHANK1-201ENST00000293441 LINC00310P59036 64 aa12.19□□□□□ -0.46
SHANK1-201ENST00000293441 ATP5EP56381 51 aaPredicted RBP12.19□□□□□ -0.46
SHANK1-201ENST00000293441 V9GYY9 64 aa12.19□□□□□ -0.46
SHANK1-201ENST00000293441 Q6JHZ5 121 aa12.19□□□□□ -0.46
SHANK1-201ENST00000293441 F8WDY8 70 aa12.19□□□□□ -0.46
SHANK1-201ENST00000293441 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
SHANK1-201ENST00000293441 PRYO14603 147 aa12.18□□□□□ -0.46
SHANK1-201ENST00000293441 COX8CQ7Z4L0 72 aa12.18□□□□□ -0.46
SHANK1-201ENST00000293441 A6NED7 52 aa12.17□□□□□ -0.46
SHANK1-201ENST00000293441 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
SHANK1-201ENST00000293441 A0A0U1RQV1 116 aa12.16□□□□□ -0.46
SHANK1-201ENST00000293441 PRLHP81277 87 aa12.16□□□□□ -0.46
SHANK1-201ENST00000293441 MDFIQ99750 246 aa12.16□□□□□ -0.46
SHANK1-201ENST00000293441 A8MTW9 85 aa12.16□□□□□ -0.46
SHANK1-201ENST00000293441 X6R8D5 127 aa12.16□□□□□ -0.46
SHANK1-201ENST00000293441 Q8N2B8 174 aa12.15□□□□□ -0.46
SHANK1-201ENST00000293441 LINC00208Q96KT6 92 aa12.15□□□□□ -0.46
SHANK1-201ENST00000293441 LINC01547P58512 204 aaPredicted RBP12.15□□□□□ -0.47
SHANK1-201ENST00000293441 XGP55808 180 aa12.13□□□□□ -0.47
SHANK1-201ENST00000293441 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
SHANK1-201ENST00000293441 A0A087WSZ3 146 aa12.13□□□□□ -0.47
SHANK1-201ENST00000293441 COX7CP15954 63 aa12.13□□□□□ -0.47
SHANK1-201ENST00000293441 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
SHANK1-201ENST00000293441 CCDC179H3BU77 68 aa12.11□□□□□ -0.47
SHANK1-201ENST00000293441 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
SHANK1-201ENST00000293441 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
SHANK1-201ENST00000293441 LINC01561Q8N1V8 128 aa12.09□□□□□ -0.47
SHANK1-201ENST00000293441 COL4A2P08572 1712 aa12.09□□□□□ -0.47
SHANK1-201ENST00000293441 A0A096LNJ9 63 aa12.09□□□□□ -0.47
SHANK1-201ENST00000293441 COL27A1Q8IZC6 1860 aaPredicted RBP12.09□□□□□ -0.47
SHANK1-201ENST00000293441 A0A087WVE0 104 aa12.08□□□□□ -0.47
SHANK1-201ENST00000293441 SBSPONQ8IVN8 264 aa12.08□□□□□ -0.47
SHANK1-201ENST00000293441 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
SHANK1-201ENST00000293441 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
SHANK1-201ENST00000293441 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
SHANK1-201ENST00000293441 Q6Q795 121 aa12.07□□□□□ -0.48
SHANK1-201ENST00000293441 TRAV7A0A075B6U4 112 aa12.06□□□□□ -0.48
SHANK1-201ENST00000293441 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
SHANK1-201ENST00000293441 KRTAP24-1Q3LI83 254 aa12.06□□□□□ -0.48
SHANK1-201ENST00000293441 SPINK1P00995 79 aa12.06□□□□□ -0.48
SHANK1-201ENST00000293441 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
SHANK1-201ENST00000293441 LRRK2Q5S007 2527 aa12.05□□□□□ -0.48
SHANK1-201ENST00000293441 PTPRBP23467 1997 aa12.03□□□□□ -0.48
SHANK1-201ENST00000293441 KIF25-AS1Q9Y6Z4 181 aa12.02□□□□□ -0.48
SHANK1-201ENST00000293441 Q8N3U1 123 aa12.02□□□□□ -0.49
SHANK1-201ENST00000293441 H0Y9P7 68 aa12.01□□□□□ -0.49
SHANK1-201ENST00000293441 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
SHANK1-201ENST00000293441 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
SHANK1-201ENST00000293441 DOPEY1Q5JWR5 2465 aa12□□□□□ -0.49
SHANK1-201ENST00000293441 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
SHANK1-201ENST00000293441 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
SHANK1-201ENST00000293441 JMJD1CQ15652 2540 aa11.97□□□□□ -0.49
SHANK1-201ENST00000293441 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
SHANK1-201ENST00000293441 SPACA4Q8TDM5 124 aa11.97□□□□□ -0.49
SHANK1-201ENST00000293441 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
SHANK1-201ENST00000293441 ZFYVE26Q68DK2 2539 aa11.96□□□□□ -0.5
SHANK1-201ENST00000293441 MOBPQ13875 183 aa11.95□□□□□ -0.5
SHANK1-201ENST00000293441 SOSTDC1Q6X4U4 206 aa11.95□□□□□ -0.5
SHANK1-201ENST00000293441 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
SHANK1-201ENST00000293441 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
SHANK1-201ENST00000293441 MUC4Q99102 2169 aa11.95□□□□□ -0.5
SHANK1-201ENST00000293441 LINC00315P59091 139 aa11.94□□□□□ -0.5
SHANK1-201ENST00000293441 GOLGB1Q14789 3259 aaKnown RBP11.93□□□□□ -0.5
SHANK1-201ENST00000293441 IGHV3OR16-9A0A0B4J2B5 98 aa11.93□□□□□ -0.5
SHANK1-201ENST00000293441 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
SHANK1-201ENST00000293441 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
SHANK1-201ENST00000293441 IGKV2D-30A0A075B6S6 120 aa11.92□□□□□ -0.5
SHANK1-201ENST00000293441 IGKV2-30P06310 120 aa11.92□□□□□ -0.5
SHANK1-201ENST00000293441 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
SHANK1-201ENST00000293441 PHF5AQ7RTV0 110 aaKnown RBP11.91□□□□□ -0.5
SHANK1-201ENST00000293441 FN1P02751 2386 aaKnown RBP11.91□□□□□ -0.5
SHANK1-201ENST00000293441 RTL8CO15255 209 aa11.91□□□□□ -0.5
SHANK1-201ENST00000293441 LINC00846Q9NV44 126 aa11.91□□□□□ -0.5
SHANK1-201ENST00000293441 CHTF8P0CG12 524 aa11.9□□□□□ -0.5
SHANK1-201ENST00000293441 FAM229AH3BQW9 127 aa11.89□□□□□ -0.51
SHANK1-201ENST00000293441 PCSK5Q92824 1860 aa11.89□□□□□ -0.51
SHANK1-201ENST00000293441 H3BNG1 76 aa11.89□□□□□ -0.51
SHANK1-201ENST00000293441 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms