RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
UPF3B-201ENST00000276201 KNCNA6PVL3 124 aa7.31□□□□□ -1.24
UPF3B-201ENST00000276201 K7EIL1 84 aa7.31□□□□□ -1.24
UPF3B-201ENST00000276201 Q6JHZ5 121 aa7.31□□□□□ -1.24
UPF3B-201ENST00000276201 Q9UF83 564 aa7.31□□□□□ -1.24
UPF3B-201ENST00000276201 PRKDCP78527 4128 aaKnown RBP7.3□□□□□ -1.24
UPF3B-201ENST00000276201 H0YGX0 51 aa7.3□□□□□ -1.24
UPF3B-201ENST00000276201 DEFB131AP59861 70 aa7.3□□□□□ -1.24
UPF3B-201ENST00000276201 INSP01308 110 aa7.3□□□□□ -1.24
UPF3B-201ENST00000276201 FAM218AQ96MZ4 157 aa7.3□□□□□ -1.24
UPF3B-201ENST00000276201 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
UPF3B-201ENST00000276201 CDC42SE2Q9NRR3 84 aa7.29□□□□□ -1.24
UPF3B-201ENST00000276201 J3KT08 172 aa7.28□□□□□ -1.24
UPF3B-201ENST00000276201 IGLV1-51P01701 117 aa7.28□□□□□ -1.24
UPF3B-201ENST00000276201 CRPP02741 224 aa7.28□□□□□ -1.24
UPF3B-201ENST00000276201 SORL1Q92673 2214 aa7.28□□□□□ -1.24
UPF3B-201ENST00000276201 IGHV3-38A0A0C4DH36 116 aa7.27□□□□□ -1.24
UPF3B-201ENST00000276201 LINC00694P0DN24 101 aa7.27□□□□□ -1.24
UPF3B-201ENST00000276201 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.24
UPF3B-201ENST00000276201 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.24
UPF3B-201ENST00000276201 TGP01266 2768 aa7.27□□□□□ -1.25
UPF3B-201ENST00000276201 RPL18AQ02543 176 aaKnown RBP7.27□□□□□ -1.25
UPF3B-201ENST00000276201 MAP6D1Q9H9H5 199 aa7.27□□□□□ -1.25
UPF3B-201ENST00000276201 K7EQD1 137 aa7.26□□□□□ -1.25
UPF3B-201ENST00000276201 KLK5Q9Y337 293 aaPredicted RBP7.26□□□□□ -1.25
UPF3B-201ENST00000276201 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
UPF3B-201ENST00000276201 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
UPF3B-201ENST00000276201 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
UPF3B-201ENST00000276201 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
UPF3B-201ENST00000276201 HTN1P15515 57 aa7.25□□□□□ -1.25
UPF3B-201ENST00000276201 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 IBA57-AS1B1ANH7 110 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 TMEM258P61165 79 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 DEFB114Q30KQ6 69 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 COX7B2Q8TF08 81 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 DYNLRB2Q8TF09 96 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 DNAL4O96015 105 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
UPF3B-201ENST00000276201 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
UPF3B-201ENST00000276201 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
UPF3B-201ENST00000276201 SMIM11BQ8TCY0 68 aa7.23□□□□□ -1.25
UPF3B-201ENST00000276201 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
UPF3B-201ENST00000276201 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 C5orf47Q569G3 176 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 ATP5EP2Q5VTU8 51 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 PRM2P04554 102 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
UPF3B-201ENST00000276201 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
UPF3B-201ENST00000276201 C1orf158Q8N1D5 194 aa7.21□□□□□ -1.26
UPF3B-201ENST00000276201 B9D2Q9BPU9 175 aa7.21□□□□□ -1.26
UPF3B-201ENST00000276201 A0A087WYN8 130 aa7.2□□□□□ -1.26
UPF3B-201ENST00000276201 Q9HAA7 133 aa7.2□□□□□ -1.26
UPF3B-201ENST00000276201 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
UPF3B-201ENST00000276201 CCL18P55774 89 aa7.2□□□□□ -1.26
UPF3B-201ENST00000276201 LINC01561Q8N1V8 128 aa7.2□□□□□ -1.26
UPF3B-201ENST00000276201 UBE2L6O14933 153 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 CCKP06307 115 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 TRBV6-4A0A1B0GX49 114 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 BCE1O60756 84 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 LYPD5Q6UWN5 251 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
UPF3B-201ENST00000276201 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 A0A087WZ39 114 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 IGHV3OR16-9A0A0B4J2B5 98 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 SMIM9A6NGZ8 99 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 JMJD7-PLA2G4BH0Y9G9 81 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-201ENST00000276201 FAM19A5Q7Z5A7 132 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-201ENST00000276201 WFDC10AQ9H1F0 79 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 C14orf132Q9NPU4 83 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
UPF3B-201ENST00000276201 hADV29S1A0JD25 119 aa7.17□□□□□ -1.26
UPF3B-201ENST00000276201 ODF3L2Q3SX64 289 aa7.17□□□□□ -1.26
UPF3B-201ENST00000276201 USP17L23D6RBM5 183 aa7.17□□□□□ -1.26
UPF3B-201ENST00000276201 LINC00158P58513 81 aa7.17□□□□□ -1.26
UPF3B-201ENST00000276201 SS18Q15532 418 aa7.16□□□□□ -1.26
UPF3B-201ENST00000276201 C9orf129Q5T035 196 aaKnown RBP7.16□□□□□ -1.26
UPF3B-201ENST00000276201 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
UPF3B-201ENST00000276201 LECT2O14960 151 aa7.16□□□□□ -1.26
UPF3B-201ENST00000276201 Q6ZTI0 123 aa7.16□□□□□ -1.26
UPF3B-201ENST00000276201 STHQ8IWL8 128 aa7.16□□□□□ -1.26
UPF3B-201ENST00000276201 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.26
UPF3B-201ENST00000276201 C16orf74Q96GX8 76 aa7.15□□□□□ -1.26
UPF3B-201ENST00000276201 XCL2Q9UBD3 114 aa7.15□□□□□ -1.26
UPF3B-201ENST00000276201 NDUFC2O95298 119 aa7.15□□□□□ -1.27
UPF3B-201ENST00000276201 IGKV3D-7A0A0C4DH55 119 aa7.14□□□□□ -1.27
UPF3B-201ENST00000276201 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
UPF3B-201ENST00000276201 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
UPF3B-201ENST00000276201 PLAC8L1A1L4L8 177 aa7.13□□□□□ -1.27
UPF3B-201ENST00000276201 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
UPF3B-201ENST00000276201 STAB2Q8WWQ8 2551 aa7.13□□□□□ -1.27
UPF3B-201ENST00000276201 TMEM256-PLSCR3K7ERE1 68 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms