RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 CCDC168Q8NDH2 2452 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 LY6G6DO95868 133 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 MIFP14174 115 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 Q6ZSN1 163 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 CCL18P55774 89 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 Q6ZRU5 148 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
FOXN3-201ENST00000261302 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
FOXN3-201ENST00000261302 C5orf56Q8N8D9 126 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 SIRPDQ9H106 197 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 LAMTOR3Q9UHA4 124 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 SNRPD3P62318 126 aaKnown RBP8.92□□□□□ -0.98
FOXN3-201ENST00000261302 SPINK13Q1W4C9 94 aa8.92□□□□□ -0.98
FOXN3-201ENST00000261302 CREBBPQ92793 2442 aa8.91□□□□□ -0.98
FOXN3-201ENST00000261302 IGHV4-61A0A0C4DH41 118 aa8.91□□□□□ -0.98
FOXN3-201ENST00000261302 MAPK1IP1LQ8NDC0 245 aa8.91□□□□□ -0.98
FOXN3-201ENST00000261302 CR1P17927 2039 aa8.91□□□□□ -0.98
FOXN3-201ENST00000261302 ITPR3Q14573 2671 aa8.91□□□□□ -0.98
FOXN3-201ENST00000261302 IGKV3-20P01619 116 aa8.9□□□□□ -0.98
FOXN3-201ENST00000261302 KRTAP1-1Q07627 177 aa8.9□□□□□ -0.98
FOXN3-201ENST00000261302 Q6ZTI0 123 aa8.9□□□□□ -0.98
FOXN3-201ENST00000261302 IGHV3-53P01767 116 aa8.9□□□□□ -0.99
FOXN3-201ENST00000261302 SMR3AQ99954 134 aa8.9□□□□□ -0.99
FOXN3-201ENST00000261302 HIVEP1P15822 2718 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 CXCL6P80162 114 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 ESRGQ1W209 222 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 Q8N814 137 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 MOB4Q9Y3A3 225 aa8.89□□□□□ -0.99
FOXN3-201ENST00000261302 TRBV6-4A0A1B0GX49 114 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 IGHV4-31P0DP07 118 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 LINC00158P58513 81 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 Q6ZQT0 140 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 COX7B2Q8TF08 81 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 K7EMT4 169 aa8.88□□□□□ -0.99
FOXN3-201ENST00000261302 LOC110117498A0A087WWA1 95 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 SAA4P35542 130 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 LMO4P61968 165 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 Q6ZVQ6 151 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 Q8N3U1 123 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
FOXN3-201ENST00000261302 H3BUA1 57 aa8.86□□□□□ -0.99
FOXN3-201ENST00000261302 PAX4O43316 350 aa8.86□□□□□ -0.99
FOXN3-201ENST00000261302 IGHV3-11P01762 117 aa8.86□□□□□ -0.99
FOXN3-201ENST00000261302 LINC01356Q8N9X3 169 aa8.86□□□□□ -0.99
FOXN3-201ENST00000261302 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
FOXN3-201ENST00000261302 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
FOXN3-201ENST00000261302 K7EQG2 157 aa8.85□□□□□ -0.99
FOXN3-201ENST00000261302 HAMPP81172 84 aa8.85□□□□□ -0.99
FOXN3-201ENST00000261302 CD164Q04900 197 aa8.85□□□□□ -0.99
FOXN3-201ENST00000261302 B4DSR2 109 aa8.85□□□□□ -0.99
FOXN3-201ENST00000261302 K7EQD1 137 aa8.85□□□□□ -0.99
FOXN3-201ENST00000261302 F8P00451 2351 aa8.84□□□□□ -0.99
FOXN3-201ENST00000261302 ZFP36P26651 326 aaKnown RBP8.84□□□□□ -0.99
FOXN3-201ENST00000261302 NREPQ16612 68 aa8.84□□□□□ -0.99
FOXN3-201ENST00000261302 MAP1AP78559 2803 aaPredicted RBP8.83□□□□□ -1
FOXN3-201ENST00000261302 MSMBP08118 114 aa8.83□□□□□ -1
FOXN3-201ENST00000261302 A0A1W2PRX2 142 aa8.82□□□□□ -1
FOXN3-201ENST00000261302 Q6ZTC4 211 aa8.82□□□□□ -1
FOXN3-201ENST00000261302 DYNLRB2Q8TF09 96 aa8.82□□□□□ -1
FOXN3-201ENST00000261302 HTN1P15515 57 aa8.81□□□□□ -1
FOXN3-201ENST00000261302 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
FOXN3-201ENST00000261302 INAFM1C9JVW0 142 aa8.81□□□□□ -1
FOXN3-201ENST00000261302 M0R2N4 97 aa8.8□□□□□ -1
FOXN3-201ENST00000261302 PRYO14603 147 aa8.8□□□□□ -1
FOXN3-201ENST00000261302 FUSP35637 526 aaKnown RBP eCLIP8.8□□□□□ -13e-8■□□□□ 10.9
FOXN3-201ENST00000261302 C6orf223Q8N319 242 aa8.8□□□□□ -1
FOXN3-201ENST00000261302 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
FOXN3-201ENST00000261302 ANK3Q12955 4377 aaKnown RBP8.79□□□□□ -1
FOXN3-201ENST00000261302 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 Q1T7F1 81 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
FOXN3-201ENST00000261302 ACANP16112 2415 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
FOXN3-201ENST00000261302 PDE6GP18545 87 aa8.78□□□□□ -1
FOXN3-201ENST00000261302 BPY2O14599 106 aa8.78□□□□□ -1
FOXN3-201ENST00000261302 RETNQ9HD89 108 aa8.78□□□□□ -1
FOXN3-201ENST00000261302 ZANQ9Y493 2812 aa8.77□□□□□ -1
FOXN3-201ENST00000261302 A0A087WZ39 114 aa8.77□□□□□ -1.01
FOXN3-201ENST00000261302 PRM2P04554 102 aa8.77□□□□□ -1.01
FOXN3-201ENST00000261302 RNASE1P07998 156 aaKnown RBP8.76□□□□□ -1.01
FOXN3-201ENST00000261302 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
FOXN3-201ENST00000261302 C11orf44Q8N8P7 122 aa8.76□□□□□ -1.01
FOXN3-201ENST00000261302 hDV103S1A0JD37 113 aa8.75□□□□□ -1.01
FOXN3-201ENST00000261302 A8MTW9 85 aa8.75□□□□□ -1.01
FOXN3-201ENST00000261302 DAD1P61803 113 aa8.75□□□□□ -1.01
FOXN3-201ENST00000261302 IGHV4-38-2P0DP08 117 aa8.75□□□□□ -1.01
FOXN3-201ENST00000261302 IGHV3OR16-9A0A0B4J2B5 98 aa8.74□□□□□ -1.01
FOXN3-201ENST00000261302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.74□□□□□ -1.01
FOXN3-201ENST00000261302 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
FOXN3-201ENST00000261302 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
FOXN3-201ENST00000261302 FSHBP01225 129 aa8.73□□□□□ -1.01
FOXN3-201ENST00000261302 Q6ZRP5 223 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms