RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 VAMP3Q15836 100 aa11.74□□□□□ -0.53
HOXC6-201ENST00000243108 LELP1Q5T871 98 aa11.74□□□□□ -0.53
HOXC6-201ENST00000243108 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
HOXC6-201ENST00000243108 LRP1BQ9NZR2 4599 aa11.73□□□□□ -0.53
HOXC6-201ENST00000243108 H3BUT2 72 aa11.73□□□□□ -0.53
HOXC6-201ENST00000243108 UBE2V1Q13404 147 aa11.73□□□□□ -0.53
HOXC6-201ENST00000243108 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
HOXC6-201ENST00000243108 KRTAP17-1Q9BYP8 105 aa11.73□□□□□ -0.53
HOXC6-201ENST00000243108 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
HOXC6-201ENST00000243108 TIMM17BO60830 172 aa11.72□□□□□ -0.53
HOXC6-201ENST00000243108 CCL25O15444 150 aa11.72□□□□□ -0.53
HOXC6-201ENST00000243108 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
HOXC6-201ENST00000243108 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
HOXC6-201ENST00000243108 RYR1P21817 5038 aa11.71□□□□□ -0.53
HOXC6-201ENST00000243108 A0A087WZ39 114 aa11.7□□□□□ -0.54
HOXC6-201ENST00000243108 A0A1W2PPM0 123 aa11.7□□□□□ -0.54
HOXC6-201ENST00000243108 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
HOXC6-201ENST00000243108 PCLOQ9Y6V0 5065 aa11.7□□□□□ -0.54
HOXC6-201ENST00000243108 SS18Q15532 418 aa11.69□□□□□ -0.54
HOXC6-201ENST00000243108 NAA38Q9BRA0 125 aaKnown RBP11.69□□□□□ -0.54
HOXC6-201ENST00000243108 HSPG2P98160 4391 aa11.69□□□□□ -0.54
HOXC6-201ENST00000243108 DNAH5Q8TE73 4624 aa11.69□□□□□ -0.54
HOXC6-201ENST00000243108 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
HOXC6-201ENST00000243108 LYPD5Q6UWN5 251 aa11.69□□□□□ -0.54
HOXC6-201ENST00000243108 MIAQ16674 131 aa11.68□□□□□ -0.54
HOXC6-201ENST00000243108 MUSTN1Q8IVN3 82 aa11.68□□□□□ -0.54
HOXC6-201ENST00000243108 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
HOXC6-201ENST00000243108 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
HOXC6-201ENST00000243108 Q8N3U1 123 aa11.67□□□□□ -0.54
HOXC6-201ENST00000243108 CFC1BP0CG36 223 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 CFC1P0CG37 223 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 HERV-K104P63124 156 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 LINC01561Q8N1V8 128 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 A4D1N5 150 aa11.66□□□□□ -0.54
HOXC6-201ENST00000243108 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
HOXC6-201ENST00000243108 FABP2P12104 132 aa11.65□□□□□ -0.54
HOXC6-201ENST00000243108 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
HOXC6-201ENST00000243108 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
HOXC6-201ENST00000243108 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.55
HOXC6-201ENST00000243108 K7EP34 96 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 APOMO95445 188 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 IFITM1P13164 125 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 XCL1P47992 114 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 REG3AQ06141 175 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 CIRBPQ14011 172 aaKnown RBP11.64□□□□□ -0.55
HOXC6-201ENST00000243108 TTC32Q5I0X7 151 aa11.64□□□□□ -0.55
HOXC6-201ENST00000243108 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
HOXC6-201ENST00000243108 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
HOXC6-201ENST00000243108 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
HOXC6-201ENST00000243108 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
HOXC6-201ENST00000243108 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
HOXC6-201ENST00000243108 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.62□□□□□ -0.55
HOXC6-201ENST00000243108 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
HOXC6-201ENST00000243108 PRSS2P07478 247 aa11.62□□□□□ -0.55
HOXC6-201ENST00000243108 Q6ZRN7 208 aaPredicted RBP11.62□□□□□ -0.55
HOXC6-201ENST00000243108 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
HOXC6-201ENST00000243108 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
HOXC6-201ENST00000243108 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
HOXC6-201ENST00000243108 TSPAN13O95857 204 aa11.6□□□□□ -0.55
HOXC6-201ENST00000243108 TOMM7Q9P0U1 55 aa11.6□□□□□ -0.55
HOXC6-201ENST00000243108 PRO1854Q9UHT4 67 aa11.6□□□□□ -0.55
HOXC6-201ENST00000243108 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
HOXC6-201ENST00000243108 ABCA13Q86UQ4 5058 aa11.59□□□□□ -0.55
HOXC6-201ENST00000243108 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
HOXC6-201ENST00000243108 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
HOXC6-201ENST00000243108 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
HOXC6-201ENST00000243108 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
HOXC6-201ENST00000243108 MEIG1Q5JSS6 88 aa11.58□□□□□ -0.56
HOXC6-201ENST00000243108 Q8IZM0 81 aa11.58□□□□□ -0.56
HOXC6-201ENST00000243108 DAND5Q8N907 189 aa11.58□□□□□ -0.56
HOXC6-201ENST00000243108 COX7A2LO14548 114 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 FOXI1Q12951 378 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 KLK12Q9UKR0 248 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 IGHV3-33P01772 117 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
HOXC6-201ENST00000243108 IGLV10-54A0A075B6I4 117 aa11.56□□□□□ -0.56
HOXC6-201ENST00000243108 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
HOXC6-201ENST00000243108 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
HOXC6-201ENST00000243108 NPC2P61916 151 aa11.55□□□□□ -0.56
HOXC6-201ENST00000243108 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
HOXC6-201ENST00000243108 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
HOXC6-201ENST00000243108 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
HOXC6-201ENST00000243108 A0A0U1RRA0 63 aa11.54□□□□□ -0.56
HOXC6-201ENST00000243108 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
HOXC6-201ENST00000243108 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
HOXC6-201ENST00000243108 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.56
HOXC6-201ENST00000243108 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.56
HOXC6-201ENST00000243108 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.56
HOXC6-201ENST00000243108 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.57
HOXC6-201ENST00000243108 LYRM7Q5U5X0 104 aa11.52□□□□□ -0.57
HOXC6-201ENST00000243108 CRPP02741 224 aa11.51□□□□□ -0.57
HOXC6-201ENST00000243108 MALP21145 153 aa11.51□□□□□ -0.57
HOXC6-201ENST00000243108 CXCL5P42830 114 aa11.51□□□□□ -0.57
HOXC6-201ENST00000243108 CDK2AP2O75956 126 aa11.5□□□□□ -0.57
HOXC6-201ENST00000243108 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
HOXC6-201ENST00000243108 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
HOXC6-201ENST00000243108 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
HOXC6-201ENST00000243108 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms