RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 C1orf195Q5TG92 126 aa14.21□□□□□ -0.13
HOXC13-201ENST00000243056 OBSCN-AS1Q96MR7 158 aa14.21□□□□□ -0.13
HOXC13-201ENST00000243056 LYPD5Q6UWN5 251 aa14.21□□□□□ -0.14
HOXC13-201ENST00000243056 TMEM89A2RUT3 159 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 Q9H8V8 135 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 CDKN2A-AS1Q9UH64 79 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 A0A087WYN8 130 aa14.19□□□□□ -0.14
HOXC13-201ENST00000243056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.18□□□□□ -0.14
HOXC13-201ENST00000243056 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 SMIM26A0A096LP01 95 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 NCR3O14931 201 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 PROK1P58294 105 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 FAM19A1Q7Z5A9 133 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 BRK1Q8WUW1 75 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 KLLNB2CW77 178 aa14.16□□□□□ -0.14
HOXC13-201ENST00000243056 LINC00474Q9P2X8 69 aa14.16□□□□□ -0.14
HOXC13-201ENST00000243056 C4orf3Q8WVX3 66 aa14.15□□□□□ -0.14
HOXC13-201ENST00000243056 KNCNA6PVL3 124 aa14.14□□□□□ -0.15
HOXC13-201ENST00000243056 IGHV3-16A0A0C4DH30 117 aa14.14□□□□□ -0.15
HOXC13-201ENST00000243056 PIK3CD-AS1Q5SR53 167 aa14.13□□□□□ -0.15
HOXC13-201ENST00000243056 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
HOXC13-201ENST00000243056 ENHOQ6UWT2 76 aa14.11□□□□□ -0.15
HOXC13-201ENST00000243056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.11□□□□□ -0.15
HOXC13-201ENST00000243056 IGKV2-29A2NJV5 120 aaPredicted RBP14.11□□□□□ -0.15
HOXC13-201ENST00000243056 CCL24O00175 119 aa14.1□□□□□ -0.15
HOXC13-201ENST00000243056 COX6A2Q02221 97 aa14.1□□□□□ -0.15
HOXC13-201ENST00000243056 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 CHCHD7Q9BUK0 85 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 LINC00482Q8N8I6 264 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 COPS9Q8WXC6 57 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 IGLV5-39A0A0G2JS06 123 aa14.08□□□□□ -0.16
HOXC13-201ENST00000243056 SPATA3Q8NHX4 192 aa14.08□□□□□ -0.16
HOXC13-201ENST00000243056 K7EMT4 169 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 IGHV3-73A0A0B4J1V6 119 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 SS18Q15532 418 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 Q9UF83 564 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 CCKP06307 115 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 RMI2Q96E14 147 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 SNURFQ9Y675 71 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 SLPIP03973 132 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 LINC00467Q9BRT7 94 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 CRPP02741 224 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 MIR7-3HGQ8N6C7 128 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 SMIM11BQ8TCY0 68 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 PKD1L1Q8TDX9 2849 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 TRBV7-6A0A0J9YX20 115 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 LECT2O14960 151 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 KLKP1Q107X0 134 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 ATP5EP2Q5VTU8 51 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 IGKV2-28A0A075B6P5 120 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 IGKV2D-28P01615 120 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 TRAV13-2A0A0B4J235 113 aa14.03□□□□□ -0.16
HOXC13-201ENST00000243056 F8WEM9 126 aa14.03□□□□□ -0.16
HOXC13-201ENST00000243056 TRAV7A0A075B6U4 112 aa14.02□□□□□ -0.16
HOXC13-201ENST00000243056 KRTAP24-1Q3LI83 254 aa14.02□□□□□ -0.17
HOXC13-201ENST00000243056 SMIM1B2RUZ4 78 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 PF4P02776 101 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 RBM3P98179 157 aaKnown RBP14□□□□□ -0.17
HOXC13-201ENST00000243056 IGKV3-20P01619 116 aa14□□□□□ -0.17
HOXC13-201ENST00000243056 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV3OR16-12A0A075B7B8 117 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 LINC00242Q5T6M2 205 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
HOXC13-201ENST00000243056 DEFB114Q30KQ6 69 aa13.97□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV1OR15-1A0A075B7D0 117 aa13.96□□□□□ -0.17
HOXC13-201ENST00000243056 H0YGX0 51 aa13.96□□□□□ -0.17
HOXC13-201ENST00000243056 TRBV10-3A0A0K0K1G6 114 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 FAM229BQ4G0N7 80 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 K7EQG2 157 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
HOXC13-201ENST00000243056 Q6ZSN1 163 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
HOXC13-201ENST00000243056 SND1-IT1Q9HBX3 110 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 ORMDL1Q9P0S3 153 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 TRAV10A0A0B4J240 114 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 DEFB131AP59861 70 aa13.92□□□□□ -0.18
HOXC13-201ENST00000243056 MPLKIPQ8TAP9 179 aa13.92□□□□□ -0.18
HOXC13-201ENST00000243056 BCE1O60756 84 aa13.91□□□□□ -0.18
HOXC13-201ENST00000243056 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
HOXC13-201ENST00000243056 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
HOXC13-201ENST00000243056 SNRPD3P62318 126 aaKnown RBP13.89□□□□□ -0.19
HOXC13-201ENST00000243056 NBEAL2Q6ZNJ1 2754 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 DGAT2L7PQ6IED9 249 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 UBL5Q9BZL1 73 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 Q6ZTI0 123 aa13.88□□□□□ -0.19
HOXC13-201ENST00000243056 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
HOXC13-201ENST00000243056 MAP6D1Q9H9H5 199 aa13.85□□□□□ -0.19
HOXC13-201ENST00000243056 JMJD7-PLA2G4BH0Y9G9 81 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 CCL18P55774 89 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 FAM19A3Q7Z5A8 133 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 PRM2P04554 102 aa13.83□□□□□ -0.19
HOXC13-201ENST00000243056 NOTCH1P46531 2555 aa13.83□□□□□ -0.2
HOXC13-201ENST00000243056 IGLV1-51P01701 117 aa13.83□□□□□ -0.2
HOXC13-201ENST00000243056 HTN1P15515 57 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms