RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 C1orf195Q5TG92 126 aa14.21□□□□□ -0.13
HOXC13-201ENST00000243056 OBSCN-AS1Q96MR7 158 aa14.21□□□□□ -0.13
HOXC13-201ENST00000243056 LYPD5Q6UWN5 251 aa14.21□□□□□ -0.14
HOXC13-201ENST00000243056 TMEM89A2RUT3 159 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 Q9H8V8 135 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 CDKN2A-AS1Q9UH64 79 aa14.2□□□□□ -0.14
HOXC13-201ENST00000243056 A0A087WYN8 130 aa14.19□□□□□ -0.14
HOXC13-201ENST00000243056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.18□□□□□ -0.14
HOXC13-201ENST00000243056 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 SMIM26A0A096LP01 95 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 NCR3O14931 201 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 PROK1P58294 105 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 FAM19A1Q7Z5A9 133 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 BRK1Q8WUW1 75 aa14.17□□□□□ -0.14
HOXC13-201ENST00000243056 KLLNB2CW77 178 aa14.16□□□□□ -0.14
HOXC13-201ENST00000243056 LINC00474Q9P2X8 69 aa14.16□□□□□ -0.14
HOXC13-201ENST00000243056 C4orf3Q8WVX3 66 aa14.15□□□□□ -0.14
HOXC13-201ENST00000243056 KNCNA6PVL3 124 aa14.14□□□□□ -0.15
HOXC13-201ENST00000243056 IGHV3-16A0A0C4DH30 117 aa14.14□□□□□ -0.15
HOXC13-201ENST00000243056 PIK3CD-AS1Q5SR53 167 aa14.13□□□□□ -0.15
HOXC13-201ENST00000243056 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
HOXC13-201ENST00000243056 ENHOQ6UWT2 76 aa14.11□□□□□ -0.15
HOXC13-201ENST00000243056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.11□□□□□ -0.15
HOXC13-201ENST00000243056 IGKV2-29A2NJV5 120 aaPredicted RBP14.11□□□□□ -0.15
HOXC13-201ENST00000243056 CCL24O00175 119 aa14.1□□□□□ -0.15
HOXC13-201ENST00000243056 COX6A2Q02221 97 aa14.1□□□□□ -0.15
HOXC13-201ENST00000243056 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 CHCHD7Q9BUK0 85 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 LINC00482Q8N8I6 264 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 COPS9Q8WXC6 57 aa14.09□□□□□ -0.15
HOXC13-201ENST00000243056 IGLV5-39A0A0G2JS06 123 aa14.08□□□□□ -0.16
HOXC13-201ENST00000243056 SPATA3Q8NHX4 192 aa14.08□□□□□ -0.16
HOXC13-201ENST00000243056 K7EMT4 169 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 IGHV3-73A0A0B4J1V6 119 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 SS18Q15532 418 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 Q9UF83 564 aa14.07□□□□□ -0.16
HOXC13-201ENST00000243056 CCKP06307 115 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 RMI2Q96E14 147 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 SNURFQ9Y675 71 aa14.06□□□□□ -0.16
HOXC13-201ENST00000243056 SLPIP03973 132 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 LINC00467Q9BRT7 94 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 CRPP02741 224 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 MIR7-3HGQ8N6C7 128 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 SMIM11BQ8TCY0 68 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 PKD1L1Q8TDX9 2849 aa14.05□□□□□ -0.16
HOXC13-201ENST00000243056 TRBV7-6A0A0J9YX20 115 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 LECT2O14960 151 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 KLKP1Q107X0 134 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 ATP5EP2Q5VTU8 51 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 IGKV2-28A0A075B6P5 120 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 IGKV2D-28P01615 120 aa14.04□□□□□ -0.16
HOXC13-201ENST00000243056 TRAV13-2A0A0B4J235 113 aa14.03□□□□□ -0.16
HOXC13-201ENST00000243056 F8WEM9 126 aa14.03□□□□□ -0.16
HOXC13-201ENST00000243056 TRAV7A0A075B6U4 112 aa14.02□□□□□ -0.16
HOXC13-201ENST00000243056 KRTAP24-1Q3LI83 254 aa14.02□□□□□ -0.17
HOXC13-201ENST00000243056 SMIM1B2RUZ4 78 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 PF4P02776 101 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
HOXC13-201ENST00000243056 RBM3P98179 157 aaKnown RBP14□□□□□ -0.17
HOXC13-201ENST00000243056 IGKV3-20P01619 116 aa14□□□□□ -0.17
HOXC13-201ENST00000243056 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV3OR16-12A0A075B7B8 117 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 LINC00242Q5T6M2 205 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
HOXC13-201ENST00000243056 DEFB114Q30KQ6 69 aa13.97□□□□□ -0.17
HOXC13-201ENST00000243056 IGHV1OR15-1A0A075B7D0 117 aa13.96□□□□□ -0.17
HOXC13-201ENST00000243056 H0YGX0 51 aa13.96□□□□□ -0.17
HOXC13-201ENST00000243056 TRBV10-3A0A0K0K1G6 114 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 FAM229BQ4G0N7 80 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 K7EQG2 157 aa13.95□□□□□ -0.18
HOXC13-201ENST00000243056 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
HOXC13-201ENST00000243056 Q6ZSN1 163 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
HOXC13-201ENST00000243056 SND1-IT1Q9HBX3 110 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 ORMDL1Q9P0S3 153 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 TRAV10A0A0B4J240 114 aa13.94□□□□□ -0.18
HOXC13-201ENST00000243056 DEFB131AP59861 70 aa13.92□□□□□ -0.18
HOXC13-201ENST00000243056 MPLKIPQ8TAP9 179 aa13.92□□□□□ -0.18
HOXC13-201ENST00000243056 BCE1O60756 84 aa13.91□□□□□ -0.18
HOXC13-201ENST00000243056 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
HOXC13-201ENST00000243056 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
HOXC13-201ENST00000243056 SNRPD3P62318 126 aaKnown RBP13.89□□□□□ -0.19
HOXC13-201ENST00000243056 NBEAL2Q6ZNJ1 2754 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 DGAT2L7PQ6IED9 249 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 UBL5Q9BZL1 73 aa13.89□□□□□ -0.19
HOXC13-201ENST00000243056 Q6ZTI0 123 aa13.88□□□□□ -0.19
HOXC13-201ENST00000243056 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
HOXC13-201ENST00000243056 MAP6D1Q9H9H5 199 aa13.85□□□□□ -0.19
HOXC13-201ENST00000243056 JMJD7-PLA2G4BH0Y9G9 81 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 CCL18P55774 89 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 FAM19A3Q7Z5A8 133 aa13.84□□□□□ -0.19
HOXC13-201ENST00000243056 PRM2P04554 102 aa13.83□□□□□ -0.19
HOXC13-201ENST00000243056 NOTCH1P46531 2555 aa13.83□□□□□ -0.2
HOXC13-201ENST00000243056 IGLV1-51P01701 117 aa13.83□□□□□ -0.2
HOXC13-201ENST00000243056 HTN1P15515 57 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms