RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 KIAA0087Q14695 138 aa7.77□□□□□ -1.17
KNOP1-201ENST00000219837 Q9UF83 564 aa7.76□□□□□ -1.17
KNOP1-201ENST00000219837 CADP27708 2225 aa7.76□□□□□ -1.17
KNOP1-201ENST00000219837 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
KNOP1-201ENST00000219837 C1orf64Q8NEQ6 169 aa7.75□□□□□ -1.17
KNOP1-201ENST00000219837 RTL8CO15255 209 aa7.74□□□□□ -1.17
KNOP1-201ENST00000219837 Q8N2B8 174 aa7.74□□□□□ -1.17
KNOP1-201ENST00000219837 AKAP6Q13023 2319 aa7.74□□□□□ -1.17
KNOP1-201ENST00000219837 SMIM29Q86T20 159 aa7.74□□□□□ -1.17
KNOP1-201ENST00000219837 PHF5AQ7RTV0 110 aaKnown RBP7.73□□□□□ -1.17
KNOP1-201ENST00000219837 FREM1Q5H8C1 2179 aa7.73□□□□□ -1.17
KNOP1-201ENST00000219837 FAM186AA6NE01 2351 aa7.73□□□□□ -1.17
KNOP1-201ENST00000219837 COL4A2P08572 1712 aa7.73□□□□□ -1.17
KNOP1-201ENST00000219837 CEP290O15078 2479 aa7.73□□□□□ -1.17
KNOP1-201ENST00000219837 ABCA4P78363 2273 aa7.72□□□□□ -1.17
KNOP1-201ENST00000219837 TET2Q6N021 2002 aaPredicted RBP7.71□□□□□ -1.17
KNOP1-201ENST00000219837 LINC00310P59036 64 aa7.71□□□□□ -1.18
KNOP1-201ENST00000219837 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
KNOP1-201ENST00000219837 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
KNOP1-201ENST00000219837 LINC00167Q96N53 147 aa7.7□□□□□ -1.18
KNOP1-201ENST00000219837 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
KNOP1-201ENST00000219837 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
KNOP1-201ENST00000219837 COL27A1Q8IZC6 1860 aaPredicted RBP7.7□□□□□ -1.18
KNOP1-201ENST00000219837 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
KNOP1-201ENST00000219837 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
KNOP1-201ENST00000219837 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
KNOP1-201ENST00000219837 CXCL6P80162 114 aa7.69□□□□□ -1.18
KNOP1-201ENST00000219837 A0A1B0GU69 56 aa7.68□□□□□ -1.18
KNOP1-201ENST00000219837 LINC00315P59091 139 aa7.68□□□□□ -1.18
KNOP1-201ENST00000219837 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
KNOP1-201ENST00000219837 LINC00313P59037 77 aa7.68□□□□□ -1.18
KNOP1-201ENST00000219837 MAP1BP46821 2468 aaKnown RBP7.67□□□□□ -1.18
KNOP1-201ENST00000219837 TMEM254Q8TBM7 123 aa7.67□□□□□ -1.18
KNOP1-201ENST00000219837 ACACAQ13085 2346 aa7.66□□□□□ -1.18
KNOP1-201ENST00000219837 J3QL48 77 aa7.66□□□□□ -1.18
KNOP1-201ENST00000219837 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
KNOP1-201ENST00000219837 ACYP2P14621 99 aa7.66□□□□□ -1.18
KNOP1-201ENST00000219837 KRTAP24-1Q3LI83 254 aa7.66□□□□□ -1.18
KNOP1-201ENST00000219837 A0A096LNJ9 63 aa7.65□□□□□ -1.18
KNOP1-201ENST00000219837 Q96NJ1 140 aa7.65□□□□□ -1.18
KNOP1-201ENST00000219837 C10orf142B7Z368 130 aa7.65□□□□□ -1.19
KNOP1-201ENST00000219837 Q8NBF4 154 aa7.64□□□□□ -1.19
KNOP1-201ENST00000219837 KIF25-AS1Q9Y6Z4 181 aa7.64□□□□□ -1.19
KNOP1-201ENST00000219837 NBDYA0A0U1RRE5 68 aa7.64□□□□□ -1.19
KNOP1-201ENST00000219837 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
KNOP1-201ENST00000219837 Q6ZRP5 223 aa7.64□□□□□ -1.19
KNOP1-201ENST00000219837 EPM2AB3EWF7 344 aa7.63□□□□□ -1.19
KNOP1-201ENST00000219837 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
KNOP1-201ENST00000219837 FAM19A4Q96LR4 140 aa7.62□□□□□ -1.19
KNOP1-201ENST00000219837 LINC01546A6NGU7 62 aa7.62□□□□□ -1.19
KNOP1-201ENST00000219837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.62□□□□□ -1.192e-11■■■■□ 19.3
KNOP1-201ENST00000219837 EP300Q09472 2414 aaPredicted RBP7.62□□□□□ -1.19
KNOP1-201ENST00000219837 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
KNOP1-201ENST00000219837 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
KNOP1-201ENST00000219837 H3BNG1 76 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 SPTA1P02549 2419 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 ST20-AS1Q8NBB2 130 aa7.6□□□□□ -1.19
KNOP1-201ENST00000219837 PTPRBP23467 1997 aa7.59□□□□□ -1.19
KNOP1-201ENST00000219837 AGRNO00468 2067 aa7.59□□□□□ -1.19
KNOP1-201ENST00000219837 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
KNOP1-201ENST00000219837 SHANK1Q9Y566 2161 aa7.58□□□□□ -1.2
KNOP1-201ENST00000219837 ARHGAP32A7KAX9 2087 aa7.58□□□□□ -1.2
KNOP1-201ENST00000219837 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
KNOP1-201ENST00000219837 ROS1P08922 2347 aa7.58□□□□□ -1.2
KNOP1-201ENST00000219837 ABCA1O95477 2261 aa7.57□□□□□ -1.2
KNOP1-201ENST00000219837 Q6ZRX8 168 aa7.57□□□□□ -1.2
KNOP1-201ENST00000219837 WWC2-AS2Q96NR7 200 aa7.57□□□□□ -1.2
KNOP1-201ENST00000219837 BCE1O60756 84 aa7.57□□□□□ -1.2
KNOP1-201ENST00000219837 FAM168BA1KXE4 195 aa7.56□□□□□ -1.2
KNOP1-201ENST00000219837 NCOR1O75376 2440 aa7.56□□□□□ -1.2
KNOP1-201ENST00000219837 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
KNOP1-201ENST00000219837 PCNX1Q96RV3 2341 aa7.56□□□□□ -1.2
KNOP1-201ENST00000219837 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
KNOP1-201ENST00000219837 PRR14LQ5THK1 2151 aa7.55□□□□□ -1.2
KNOP1-201ENST00000219837 Q8NAQ8 132 aa7.54□□□□□ -1.2
KNOP1-201ENST00000219837 CNOT1A5YKK6 2376 aaKnown RBP7.54□□□□□ -1.2
KNOP1-201ENST00000219837 Q6ZQT0 140 aa7.54□□□□□ -1.2
KNOP1-201ENST00000219837 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
KNOP1-201ENST00000219837 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
KNOP1-201ENST00000219837 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
KNOP1-201ENST00000219837 SPTBN2O15020 2390 aa7.52□□□□□ -1.21
KNOP1-201ENST00000219837 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
KNOP1-201ENST00000219837 C9orf92A6NGG3 77 aa7.5□□□□□ -1.21
KNOP1-201ENST00000219837 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
KNOP1-201ENST00000219837 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
KNOP1-201ENST00000219837 KRTAP10-11P60412 298 aa7.49□□□□□ -1.21
KNOP1-201ENST00000219837 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
KNOP1-201ENST00000219837 HIVEP2P31629 2446 aa7.49□□□□□ -1.21
KNOP1-201ENST00000219837 TNCP24821 2201 aa7.47□□□□□ -1.21
KNOP1-201ENST00000219837 DSCR10P59022 87 aa7.47□□□□□ -1.21
KNOP1-201ENST00000219837 PLCE1Q9P212 2302 aa7.47□□□□□ -1.21
KNOP1-201ENST00000219837 PCSK5Q92824 1860 aa7.46□□□□□ -1.21
KNOP1-201ENST00000219837 C8orf87E5RJ46 101 aa7.46□□□□□ -1.21
KNOP1-201ENST00000219837 H3BPC8 53 aa7.46□□□□□ -1.21
KNOP1-201ENST00000219837 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.21
KNOP1-201ENST00000219837 DNAH10OSP0CZ25 163 aa7.46□□□□□ -1.22
KNOP1-201ENST00000219837 GPR179Q6PRD1 2367 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms