RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Rnf126Q91YL2 313 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Shank1D3YZU1 2167 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Prss29Q99MS4 279 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 EsdQ9R0P3 282 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Trav7n-4A0A075B620 113 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Trbv12-2A0A0B4J1H1 124 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Prok2Q9QXU7 128 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Hist1h2bmP10854 126 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Ccl6P27784 116 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Hist1h2bhQ64478 126 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Hist2h2bbQ64525 126 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Rnase6Q9D244 153 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Tmem89Q9DA04 169 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 GalmQ8K157 342 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Klk7Q91VE3 249 aa13.68□□□□□ -0.22
Usp47-201ENSMUST00000106653 Igkv4-80A0A075B5L7 116 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Igkv5-37A0A140T8N4 115 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Timp3P39876 211 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Q4KKZ1 196 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Ms4a12A0A087WSB9 263 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Usmg5Q78IK2 58 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Plp1P60202 277 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Cacng7P62956 275 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 GlmpQ9JHJ3 404 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Cacna1iE9Q7P2 2199 aa13.67□□□□□ -0.22
Usp47-201ENSMUST00000106653 Igkv6-15A0A140T8M5 115 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Ighv1-67A0A0G2JFN9 117 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Gm4763Q8CFJ5 196 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Il1f10Q8R459 152 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 NmbQ9CR53 121 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 P01649 108 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Tcl1b2P56841 117 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Hspe1Q64433 102 aaKnown RBP13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Gm10306Q9CUK2 115 aa13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Mrps11Q9DCA2 191 aaKnown RBP13.66□□□□□ -0.22
Usp47-201ENSMUST00000106653 Trdv1A0A075B657 112 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 IappP12968 93 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 C1qtnf5Q8K479 243 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Pax1P09084 446 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Psmg4P0C7N9 123 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Olfr523Q8VFE7 317 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Olfr1195Q8VG21 308 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Gm13030A2APQ6 143 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Umad1E0CX23 159 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Vmn1r216Q8R257 298 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 OtosQ8R448 89 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Necap2Q9D1J1 266 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 LenepQ9WVB6 61 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 RlfA2A7F4 1918 aa13.65□□□□□ -0.22
Usp47-201ENSMUST00000106653 Klf12O35738 402 aa13.65□□□□□ -0.23
Usp47-201ENSMUST00000106653 Slc25a39Q9D8K8 359 aa13.65□□□□□ -0.23
Usp47-201ENSMUST00000106653 Scgb1b11A0A087WQJ0 93 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 H2al2bA9Z055 111 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 BC035044E0CXF8 138 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 Trav3-3Q5R1C3 114 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 Znf329Q6GQR8 522 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 3110018I06RikQ9CXS0 120 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 Erg28Q9ERY9 140 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 Trav19A0A0B4J1K4 119 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 C1qtnf9Q4ZJN1 333 aa13.64□□□□□ -0.23
Usp47-201ENSMUST00000106653 Cacna1eQ61290 2272 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Igkv12-89A0A0G2JGW8 112 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Klrd1O54707 179 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Tmem241Q3UME2 297 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Gm10775Q3V290 127 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Psmg3Q9CZH3 122 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Gm10192Q3V0S1 108 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Fbln7Q501P1 440 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Fbxl7Q5BJ29 491 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Snrnp200Q6P4T2 2136 aaKnown RBP13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Ttc9cQ810A3 171 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 BC106179Q8C9L1 186 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Crybb3Q9JJU9 211 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Lmo1Q924W9 156 aa13.63□□□□□ -0.23
Usp47-201ENSMUST00000106653 Trbv13-3A0A0B4J1H2 113 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Igh-3P01867 404 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Defa-rs12P50716 91 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Atp5iQ06185 71 aaKnown RBP13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Tmem136Q3TYE7 245 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Ighv1-18A0A0A6YXN4 117 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Gm7849D3YX03 116 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Mllt11P97783 90 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Nr2c2apQ3TV70 140 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Srsf1Q6PDM2 248 aaKnown RBP13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Atxn7l1Q9CZ05 146 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Cxcl14Q9WUQ5 99 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Pkd1l3Q2EG98 2201 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Trav6-4A0A075B6B4 115 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Cox6b1P56391 86 aaKnown RBP13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 ArtnQ9Z0L2 224 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 PtprdQ64487 1912 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Q9D727 114 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Bud31Q6PGH1 103 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Olfr1323Q8VF35 309 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Spry4Q9WTP2 300 aa13.62□□□□□ -0.23
Usp47-201ENSMUST00000106653 Ca5aP23589 299 aa13.61□□□□□ -0.23
Usp47-201ENSMUST00000106653 Fam19a2Q7TPG7 131 aa13.61□□□□□ -0.23
Usp47-201ENSMUST00000106653 SeleQ00690 612 aa13.61□□□□□ -0.23
Usp47-201ENSMUST00000106653 Gm9944Q8C559 102 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms