RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Atg2aQ6P4T0 1914 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav6n-5A0A075B621 112 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav6-5A0A075B6B5 112 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Znf787Q8BIF9 381 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ms4a8Q99N10 290 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 PtprfA2A8L5 1898 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Foxf2O54743 446 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav8-1A0A075B641 109 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Olfr317Q5NCD6 327 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Olfr484Q8VFD3 321 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Lamtor2Q9JHS3 125 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Gm21370Q3T9V6 190 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Znf474Q6V5K9 347 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Pxt1Q8K459 51 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Pgpep1lQ9CWB5 130 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 ChodlQ9CXM0 273 aa11.6□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Q8BTC1 67 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Carhsp1Q9CR86 148 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Vmn1r54Q9EPB8 315 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ighv5-6A0A075B5Q0 117 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav6d-3A0A075B6B3 112 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ighv1-20A0A0A6YX66 117 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Igkv6-23A0A140T8N5 115 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 1700084M14RikB1AT01 78 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Gm6793B2RXM2 351 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Efna4O08542 206 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav6-3Q5R1E6 112 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav3-1Q5R1I8 114 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Tm2d3Q8BJ83 261 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Mrpl16Q99N93 251 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 CompQ9R0G6 755 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ucp1P12242 307 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Lyzl1Q9CPX3 148 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Rnf138Q9CQE0 245 aaKnown RBP11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Hils1Q9QYL0 170 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ighv1-7A0A075B5T7 117 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Ighv1-67A0A0G2JFN9 117 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trdv4Q5R1A3 115 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Timm23Q9WTQ8 209 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Zfp72Q0VFY0 435 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Wdr83osQ6ZWX0 106 aa11.59□□□□□ -0.55
Col1a1-201ENSMUST00000001547 Trav21-dv12A0A075B6C4 109 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm12845A0A0N4SUM5 588 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Efnb3O35393 340 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Mcrip2Q9CQB2 160 aaKnown RBP11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Atp23Q9CWQ3 201 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm29289A0A087WPY7 166 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm4064A0A087WR82 380 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm10352B2RWR6 380 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Defa27F2Z403 93 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm21693J3QK27 380 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Rbmy1a1O35698 380 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gstp2P46425 210 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Fam19a2Q7TPG7 131 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Prss22Q9ER10 306 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 MsmbO08540 113 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Dynlt3P56387 116 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 EtdQ80SW5 59 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Fbxl15Q91W61 300 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 4930583I09RikQ9D2E3 102 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Klf13Q9JJZ6 289 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm6871L7N248 545 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Thy1P01831 162 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Zfp248Q640N4 576 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Tmem91Q8C581 172 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Cbln3Q9JHG0 197 aa11.58□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Nup210lQ9D2F7 1881 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Tomm7Q9D173 55 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Znf22Q9ERU3 237 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Igkv4-70A0A0B4J1I5 116 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bmP10854 126 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Atp5iQ06185 71 aaKnown RBP11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 C1ql4Q4ZJM9 238 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bhQ64478 126 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist2h2bbQ64525 126 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Cdcp2Q8BQH6 427 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ormdl2Q9CQZ0 153 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Lypd8Q9D7S0 255 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 CklfQ9DAS1 152 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Pmaip1Q9JM54 103 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Nat6Q9R123 314 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 TtrP07309 147 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 GchfrP99025 84 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Crybb3Q9JJU9 211 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ank3G5E8K5 1961 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 P04946 108 aa11.57□□□□□ -0.56
Col1a1-201ENSMUST00000001547 UngP97931 306 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Sec11aQ9R0P6 179 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ly6lH3BJG9 140 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Mrps21P58059 87 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Slc17a9Q8VCL5 447 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 AgaQ64191 346 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Olfr1195Q8VG21 308 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Pcdh15Q99PJ1 1943 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 NdpP48744 131 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ube2d2bQ6ZWY6 147 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm4894Q8CA09 118 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Cd69P37217 199 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 RhogP84096 191 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms