RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 Q8IZM0 81 aa7.96□□□□□ -1.13
KCNMA1-259ENST00000639406 KIAA1549Q9HCM3 1950 aa7.96□□□□□ -1.13
KCNMA1-259ENST00000639406 SYCNQ0VAF6 134 aa7.96□□□□□ -1.14
KCNMA1-259ENST00000639406 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
KCNMA1-259ENST00000639406 LINC01561Q8N1V8 128 aa7.96□□□□□ -1.14
KCNMA1-259ENST00000639406 POLEQ07864 2286 aa7.96□□□□□ -1.14
KCNMA1-259ENST00000639406 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 WDFY3Q8IZQ1 3526 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 SMIM1B2RUZ4 78 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 LINC01548A6NM66 108 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 LY6G6DO95868 133 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 TANC1Q9C0D5 1861 aa7.95□□□□□ -1.14
KCNMA1-259ENST00000639406 ABCA1O95477 2261 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 MUC7Q8TAX7 377 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 CDC42SE2Q9NRR3 84 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 ZNF580Q9UK33 172 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 COX6A2Q02221 97 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 SBSPONQ8IVN8 264 aa7.94□□□□□ -1.14
KCNMA1-259ENST00000639406 VWA8A3KMH1 1905 aa7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 NBASA2RRP1 2371 aa7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 CHD7Q9P2D1 2997 aa7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 FSHBP01225 129 aa7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
KCNMA1-259ENST00000639406 C1orf64Q8NEQ6 169 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 MDFIQ99750 246 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 ODF3BA8MYP8 253 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 KIAA1671Q9BY89 1806 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 TICRRQ7Z2Z1 1910 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 COL4A3Q01955 1670 aa7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 CNOT1A5YKK6 2376 aaKnown RBP7.92□□□□□ -1.14
KCNMA1-259ENST00000639406 PCDH15Q96QU1 1955 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 A0A1B0GU69 56 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 A6NDX4 124 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 GRNP28799 593 aaKnown RBP7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 ABCA4P78363 2273 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 GTF3C1Q12789 2109 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 ZGRF1Q86YA3 2104 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 IGLV2-18A0A075B6J9 118 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 IGLV9-49A0A0B4J1Y8 123 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 KLLNB2CW77 178 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 MSMPQ1L6U9 139 aa7.91□□□□□ -1.14
KCNMA1-259ENST00000639406 FHL2Q14192 279 aa7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 PSMG3-AS1Q96PY0 264 aa7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 LOC100131303A0A0U1RQF7 123 aa7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 DEFB116Q30KQ4 102 aa7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 LINC00336Q6ZUF6 198 aa7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
KCNMA1-259ENST00000639406 ADORA2A-AS1P86434 159 aa7.9□□□□□ -1.15
KCNMA1-259ENST00000639406 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.15
KCNMA1-259ENST00000639406 IGHV6-1A0A0B4J1U7 121 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 SPINK1P00995 79 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 TANC2Q9HCD6 1990 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 AMELXQ99217 191 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 CHCHD7Q9BUK0 85 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 CADP27708 2225 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 PRM2P04554 102 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 COL4A6Q14031 1691 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 DOPEY2Q9Y3R5 2298 aa7.89□□□□□ -1.15
KCNMA1-259ENST00000639406 CYSRT1A8MQ03 144 aa7.88□□□□□ -1.15
KCNMA1-259ENST00000639406 ROS1P08922 2347 aa7.88□□□□□ -1.15
KCNMA1-259ENST00000639406 LAMA1P25391 3075 aa7.88□□□□□ -1.15
KCNMA1-259ENST00000639406 PLXNB3Q9ULL4 1909 aa7.88□□□□□ -1.15
KCNMA1-259ENST00000639406 LY6G6CO95867 125 aa7.88□□□□□ -1.15
KCNMA1-259ENST00000639406 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
KCNMA1-259ENST00000639406 REV3LO60673 3130 aa7.87□□□□□ -1.15
KCNMA1-259ENST00000639406 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 SPTAN1Q13813 2472 aaKnown RBP7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 TRAV10A0A0B4J240 114 aa7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
KCNMA1-259ENST00000639406 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
KCNMA1-259ENST00000639406 WNK2Q9Y3S1 2297 aa7.85□□□□□ -1.15
KCNMA1-259ENST00000639406 DOCK7Q96N67 2140 aa7.85□□□□□ -1.15
KCNMA1-259ENST00000639406 FREM2Q5SZK8 3169 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 ZNF407Q9C0G0 2248 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 IGFL2Q6UWQ7 119 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 ATP11AUNQ6ZP68 121 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 GPR179Q6PRD1 2367 aa7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 FNDC1Q4ZHG4 1894 aaPredicted RBP7.84□□□□□ -1.15
KCNMA1-259ENST00000639406 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.16
KCNMA1-259ENST00000639406 TM2D3Q9BRN9 247 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 A0A087WSZ3 146 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 A8MUN3 132 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 C11orf45Q8TAV5 145 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 X6R8D5 127 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 SPTBN5Q9NRC6 3674 aaKnown RBP7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 SPATA3Q8NHX4 192 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 ALPK3Q96L96 1907 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 LINC01546A6NGU7 62 aa7.83□□□□□ -1.16
KCNMA1-259ENST00000639406 FSTL3O95633 263 aa7.82□□□□□ -1.16
KCNMA1-259ENST00000639406 Q8NA96 180 aa7.82□□□□□ -1.16
KCNMA1-259ENST00000639406 ACACAQ13085 2346 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms