RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
PSPC1-206ENST00000619300 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
PSPC1-206ENST00000619300 ZFAND6Q6FIF0 208 aa13.24□□□□□ -0.29
PSPC1-206ENST00000619300 TEX48A0A1B0GUV7 120 aa13.23□□□□□ -0.29
PSPC1-206ENST00000619300 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
PSPC1-206ENST00000619300 TMEM262E9PQX1 116 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 K7EP34 96 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 RETNQ9HD89 108 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 COL6A5A8TX70 2615 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 A0A1B0GUV1 79 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 A0A1W2PPM0 123 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 HTN3P15516 51 aa13.22□□□□□ -0.29
PSPC1-206ENST00000619300 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
PSPC1-206ENST00000619300 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
PSPC1-206ENST00000619300 CMYA5Q8N3K9 4069 aa13.21□□□□□ -0.3
PSPC1-206ENST00000619300 IGKV3OR2-268A0A0C4DH90 116 aa13.2□□□□□ -0.3
PSPC1-206ENST00000619300 IGLL5B9A064 214 aa13.2□□□□□ -0.3
PSPC1-206ENST00000619300 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
PSPC1-206ENST00000619300 VPS25Q9BRG1 176 aa13.2□□□□□ -0.3
PSPC1-206ENST00000619300 NDUFA1O15239 70 aa13.19□□□□□ -0.3
PSPC1-206ENST00000619300 LITAFQ99732 161 aa13.19□□□□□ -0.3
PSPC1-206ENST00000619300 FABP2P12104 132 aa13.18□□□□□ -0.3
PSPC1-206ENST00000619300 SH2D6Q7Z4S9 175 aa13.17□□□□□ -0.3
PSPC1-206ENST00000619300 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
PSPC1-206ENST00000619300 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
PSPC1-206ENST00000619300 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
PSPC1-206ENST00000619300 ADAMTSL4-AS1Q5T5F5 129 aa13.16□□□□□ -0.3
PSPC1-206ENST00000619300 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
PSPC1-206ENST00000619300 IGHV3OR16-9A0A0B4J2B5 98 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 TIMM17BO60830 172 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 APOMO95445 188 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 CFC1BP0CG36 223 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 CFC1P0CG37 223 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 C11orf68Q9H3H3 251 aaKnown RBP13.15□□□□□ -0.3
PSPC1-206ENST00000619300 Q9H8V8 135 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 SPCS1Q9Y6A9 102 aa13.15□□□□□ -0.3
PSPC1-206ENST00000619300 A4D1N5 150 aa13.13□□□□□ -0.31
PSPC1-206ENST00000619300 PRSS2P07478 247 aa13.13□□□□□ -0.31
PSPC1-206ENST00000619300 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
PSPC1-206ENST00000619300 CIRBPQ14011 172 aaKnown RBP13.12□□□□□ -0.31
PSPC1-206ENST00000619300 SS18Q15532 418 aa13.12□□□□□ -0.31
PSPC1-206ENST00000619300 MIAQ16674 131 aa13.12□□□□□ -0.31
PSPC1-206ENST00000619300 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
PSPC1-206ENST00000619300 A0A087WZ39 114 aa13.11□□□□□ -0.31
PSPC1-206ENST00000619300 LELP1Q5T871 98 aa13.11□□□□□ -0.31
PSPC1-206ENST00000619300 DNAH3Q8TD57 4116 aa13.11□□□□□ -0.31
PSPC1-206ENST00000619300 H3BNG1 76 aa13.09□□□□□ -0.31
PSPC1-206ENST00000619300 LINC00269Q8N2A0 174 aa13.09□□□□□ -0.31
PSPC1-206ENST00000619300 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
PSPC1-206ENST00000619300 PRO1854Q9UHT4 67 aa13.09□□□□□ -0.31
PSPC1-206ENST00000619300 ANK2Q01484 3957 aa13.08□□□□□ -0.31
PSPC1-206ENST00000619300 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.31
PSPC1-206ENST00000619300 A0A0J9YWU9 116 aa13.08□□□□□ -0.31
PSPC1-206ENST00000619300 HERV-K104P63124 156 aa13.08□□□□□ -0.31
PSPC1-206ENST00000619300 Q6ZTC4 211 aa13.08□□□□□ -0.31
PSPC1-206ENST00000619300 C5orf38Q86SI9 138 aa13.08□□□□□ -0.31
PSPC1-206ENST00000619300 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PSPC1-206ENST00000619300 XCL1P47992 114 aa13.08□□□□□ -0.32
PSPC1-206ENST00000619300 CLPSL2Q6UWE3 100 aa13.08□□□□□ -0.32
PSPC1-206ENST00000619300 A0A0B4J2C4 111 aa13.07□□□□□ -0.32
PSPC1-206ENST00000619300 IFITM1P13164 125 aa13.07□□□□□ -0.32
PSPC1-206ENST00000619300 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
PSPC1-206ENST00000619300 Q8N3U1 123 aa13.07□□□□□ -0.32
PSPC1-206ENST00000619300 EIF4EBP3O60516 100 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-206ENST00000619300 PRB2P02812 416 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-206ENST00000619300 ANGP03950 147 aaKnown RBP13.06□□□□□ -0.32
PSPC1-206ENST00000619300 TOMM7Q9P0U1 55 aa13.06□□□□□ -0.32
PSPC1-206ENST00000619300 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
PSPC1-206ENST00000619300 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
PSPC1-206ENST00000619300 DAND5Q8N907 189 aa13.05□□□□□ -0.32
PSPC1-206ENST00000619300 REG3AQ06141 175 aa13.05□□□□□ -0.32
PSPC1-206ENST00000619300 NPC2P61916 151 aa13.04□□□□□ -0.32
PSPC1-206ENST00000619300 MEIG1Q5JSS6 88 aa13.04□□□□□ -0.32
PSPC1-206ENST00000619300 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
PSPC1-206ENST00000619300 K7EIL1 84 aa13.03□□□□□ -0.32
PSPC1-206ENST00000619300 NANOS2P60321 138 aaKnown RBP13.03□□□□□ -0.32
PSPC1-206ENST00000619300 LINC01561Q8N1V8 128 aa13.03□□□□□ -0.32
PSPC1-206ENST00000619300 A0A0U1RRA0 63 aa13.02□□□□□ -0.33
PSPC1-206ENST00000619300 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
PSPC1-206ENST00000619300 CD164L2Q6UWJ8 174 aa13.02□□□□□ -0.33
PSPC1-206ENST00000619300 SPATA25Q9BR10 227 aa13.02□□□□□ -0.33
PSPC1-206ENST00000619300 LINC00308Q8TCZ7 52 aa13.01□□□□□ -0.33
PSPC1-206ENST00000619300 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
PSPC1-206ENST00000619300 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
PSPC1-206ENST00000619300 CHCHD10Q8WYQ3 142 aaPredicted RBP13.01□□□□□ -0.33
PSPC1-206ENST00000619300 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 SFTA2Q6UW10 78 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 COPS9Q8WXC6 57 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 TENM3Q9P273 2699 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 NBEAL1Q6ZS30 2694 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 DEFB131BA0A096LNP1 70 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
PSPC1-206ENST00000619300 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
PSPC1-206ENST00000619300 MDFIQ99750 246 aa12.99□□□□□ -0.33
PSPC1-206ENST00000619300 IGLV10-54A0A075B6I4 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms