RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 NBDYA0A0U1RRE5 68 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 CLPSL1A2RUU4 121 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 SSBP1Q04837 148 aaKnown RBP1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 FXYD3Q14802 87 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 OBSCN-AS1Q96MR7 158 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 C20orf78Q9BR46 151 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 BTAF1O14981 1849 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 SZT2Q5T011 3432 aa1.09□□□□□ -2.24
SCAMP1-205ENST00000614488 RGPD8O14715 1765 aaPredicted RBP1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 EEA1Q15075 1411 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 ABCA4P78363 2273 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 PDCD11Q14690 1871 aaKnown RBP1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 UBR3Q6ZT12 1888 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 H3BQF6 201 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 CHKB-CPT1BH3BT56 60 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 K7EP34 96 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 ATOX1O00244 68 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 SFT2D2O95562 160 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 CYB5AP00167 134 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 APOC3P02656 99 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 NMBP08949 121 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 TRAPPC2P0DI81 140 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 TRAPPC2BP0DI82 140 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 CCL3L1P16619 93 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 ASIPP42127 132 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 PEA15Q15121 130 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 ZNF56Q15929 161 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 GDF5OSQ5U4N7 250 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 COX7B2Q8TF08 81 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 LCN9Q8WX39 176 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 LINC00208Q96KT6 92 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 CYSTM1Q9H1C7 97 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 MED9Q9NWA0 146 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 IFT172Q9UG01 1749 aa1.08□□□□□ -2.24
SCAMP1-205ENST00000614488 UNC80Q8N2C7 3258 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 PI4KAP42356 2102 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 CEP162Q5TB80 1403 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 ANKARQ7Z5J8 1434 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 E9PCH4 1651 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 ITSN1Q15811 1721 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 TIAM2Q8IVF5 1701 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 MKI67P46013 3256 aaKnown RBP1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 KDM3BQ7LBC6 1761 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 TRAV22A0A0B4J277 110 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 A0A0G2JND7 137 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 FXYD1O00168 92 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 PPP1R17O96001 155 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 GYPAP02724 150 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 TDRG1Q3Y452 100 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 Q5VV11 94 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 Q86TA4 180 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 C5orf56Q8N8D9 126 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 MGST2Q99735 147 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 BPESC1Q9GZL8 116 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 C5P01031 1676 aa1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 SPTBN5Q9NRC6 3674 aaKnown RBP1.07□□□□□ -2.24
SCAMP1-205ENST00000614488 TOGARAM1Q9Y4F4 1720 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 RGPD5Q99666 1765 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 ARFGEF2Q9Y6D5 1785 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 KCPQ6ZWJ8 1503 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 SSC5DA1L4H1 1573 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 SPAG17Q6Q759 2223 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 TRBV7-7A0A0K0K1E9 115 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 EDDM3BP56851 147 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 ELOF1P60002 83 aaKnown RBP1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 SPAG11BQ08648 103 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 XAF1Q6GPH4 301 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 SPAG11AQ6PDA7 123 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 Q8N6K4 173 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 SERP2Q8N6R1 65 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 S100A16Q96FQ6 103 aaKnown RBP1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 NXT2Q9NPJ8 142 aaKnown RBP1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 NDUFA4L2Q9NRX3 87 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 CACFD1Q9UGQ2 172 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 PRO1854Q9UHT4 67 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 MYH4Q9Y623 1939 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 COL4A6Q14031 1691 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 C4AP0C0L4 1744 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 C4BP0C0L5 1744 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 PAPPA2Q9BXP8 1791 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 CACNA1AO00555 2505 aa1.06□□□□□ -2.24
SCAMP1-205ENST00000614488 MAP2P11137 1827 aaKnown RBP1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 VCANP13611 3396 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 FAM208AQ9UK61 1670 aaKnown RBP1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 SYS1-DBNDD2H3BUS1 97 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 HMGN4O00479 90 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 UBE2D3P61077 147 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 UBE2D2P62837 147 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 FAM74A4Q5TZK3 123 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 UNQ6190/PRO20217Q6UXQ8 127 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 FAM167A-AS1Q96KT0 104 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 TRGV9Q99603 122 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 DYNLRB1Q9NP97 96 aa1.05□□□□□ -2.24
SCAMP1-205ENST00000614488 UQCR10Q9UDW1 63 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms