RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FAM19A3Q7Z5A8 133 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 TRAV8-6A0A0B4J262 113 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 TMEM262E9PQX1 116 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 M0R143 59 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 HERVK_113P63121 156 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 LELP1Q5T871 98 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
CCDC47-207ENST00000612558 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.42
CCDC47-207ENST00000612558 IGLV4-60A0A075B6I1 120 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 TRAV13-1A0A0B4J241 112 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 LINC00242Q5T6M2 205 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 C2orf91Q6ZV80 131 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 B9D2Q9BPU9 175 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 TTTY13Q9BZ97 58 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 RBX1P62877 108 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 LYPD5Q6UWN5 251 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 LINC00469Q8N7U9 141 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
CCDC47-207ENST00000612558 TRAV10A0A0B4J240 114 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 H3BRM9 83 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 LEPROTO15243 131 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 COX6A2Q02221 97 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 PLEKHB2Q96CS7 222 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 HIGD1BQ9P298 99 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
CCDC47-207ENST00000612558 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
CCDC47-207ENST00000612558 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
CCDC47-207ENST00000612558 J3QQQ9 107 aa6.12□□□□□ -1.43
CCDC47-207ENST00000612558 LBHQ53QV2 105 aaPredicted RBP6.12□□□□□ -1.43
CCDC47-207ENST00000612558 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
CCDC47-207ENST00000612558 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
CCDC47-207ENST00000612558 IGHV3-30-3P0DP02 117 aa6.11□□□□□ -1.43
CCDC47-207ENST00000612558 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
CCDC47-207ENST00000612558 IGHV3-64A0A075B6Q5 118 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 CCL25O15444 150 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
CCDC47-207ENST00000612558 HINT1P49773 126 aaPredicted RBP6.1□□□□□ -1.43
CCDC47-207ENST00000612558 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 C15orf53Q8NAA6 179 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 ANGP03950 147 aaKnown RBP6.1□□□□□ -1.43
CCDC47-207ENST00000612558 HSD52Q0P140 79 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 SS18Q15532 418 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 BATFQ16520 125 aa6.1□□□□□ -1.43
CCDC47-207ENST00000612558 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
CCDC47-207ENST00000612558 ESRGQ1W209 222 aa6.09□□□□□ -1.43
CCDC47-207ENST00000612558 BVES-AS1Q5T3Y7 98 aa6.09□□□□□ -1.43
CCDC47-207ENST00000612558 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
CCDC47-207ENST00000612558 LINC00269Q8N2A0 174 aa6.09□□□□□ -1.43
CCDC47-207ENST00000612558 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
CCDC47-207ENST00000612558 IGHV3OR16-9A0A0B4J2B5 98 aa6.08□□□□□ -1.44
CCDC47-207ENST00000612558 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
CCDC47-207ENST00000612558 REG3AQ06141 175 aa6.08□□□□□ -1.44
CCDC47-207ENST00000612558 TAL2Q16559 108 aa6.08□□□□□ -1.44
CCDC47-207ENST00000612558 A0A087WZ39 114 aa6.07□□□□□ -1.44
CCDC47-207ENST00000612558 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
CCDC47-207ENST00000612558 ZFAND6Q6FIF0 208 aa6.07□□□□□ -1.44
CCDC47-207ENST00000612558 CLPSL2Q6UWE3 100 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 WFDC10BQ8IUB3 73 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 ORAOV1Q8WV07 137 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 PRR34Q9NV39 138 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 NDUFA12Q9UI09 145 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
CCDC47-207ENST00000612558 IGLL5B9A064 214 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 IGHV3-30P01768 117 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 IGHV3-30-5P0DP03 117 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 XCL1P47992 114 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 SPANXB1Q9NS25 103 aaPredicted RBP6.06□□□□□ -1.44
CCDC47-207ENST00000612558 KLK12Q9UKR0 248 aa6.06□□□□□ -1.44
CCDC47-207ENST00000612558 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 NDUFA1O15239 70 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 GCSHP23434 173 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
CCDC47-207ENST00000612558 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 CEND1Q8N111 149 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 C10orf126Q8N4M7 172 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
CCDC47-207ENST00000612558 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
CCDC47-207ENST00000612558 A6NDN8 102 aa6.04□□□□□ -1.44
CCDC47-207ENST00000612558 CCL18P55774 89 aa6.04□□□□□ -1.44
CCDC47-207ENST00000612558 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
CCDC47-207ENST00000612558 ENHOQ6UWT2 76 aa6.04□□□□□ -1.44
CCDC47-207ENST00000612558 DYNC2H1Q8NCM8 4307 aaKnown RBP6.03□□□□□ -1.44
CCDC47-207ENST00000612558 IGLV10-54A0A075B6I4 117 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 TRAV8-4A0A0B4J246 113 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms