RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 LINC00308Q8TCZ7 52 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 TIRAPP58753 221 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 ATRQ13535 2644 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 ODF3L2Q3SX64 289 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 PIK3CD-AS1Q5SR53 167 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 C16orf95Q9H693 158 aa12.71□□□□□ -0.37
TNIP1-221ENST00000610874 IGLV5-45A0A087WSX0 123 aa12.71□□□□□ -0.38
TNIP1-221ENST00000610874 LINC00694P0DN24 101 aa12.71□□□□□ -0.38
TNIP1-221ENST00000610874 Q6Q795 121 aa12.71□□□□□ -0.38
TNIP1-221ENST00000610874 XCL2Q9UBD3 114 aa12.71□□□□□ -0.38
TNIP1-221ENST00000610874 TRRAPQ9Y4A5 3859 aa12.71□□□□□ -0.38
TNIP1-221ENST00000610874 TRAV13-1A0A0B4J241 112 aa12.7□□□□□ -0.38
TNIP1-221ENST00000610874 INSP01308 110 aa12.7□□□□□ -0.38
TNIP1-221ENST00000610874 LINC00242Q5T6M2 205 aa12.7□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 RS1O15537 224 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE7O76087 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 GAGE4Q13068 117 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 KRTAP10-3P60369 221 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 HERVK_113P63121 156 aa12.69□□□□□ -0.38
TNIP1-221ENST00000610874 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
TNIP1-221ENST00000610874 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
TNIP1-221ENST00000610874 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
TNIP1-221ENST00000610874 SOSTDC1Q6X4U4 206 aa12.67□□□□□ -0.38
TNIP1-221ENST00000610874 IGLV5-39A0A0G2JS06 123 aa12.66□□□□□ -0.38
TNIP1-221ENST00000610874 PRIMA1Q86XR5 153 aa12.66□□□□□ -0.38
TNIP1-221ENST00000610874 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
TNIP1-221ENST00000610874 FAM240AA0A1B0GVK7 77 aa12.65□□□□□ -0.38
TNIP1-221ENST00000610874 DEFB121Q5J5C9 76 aa12.65□□□□□ -0.38
TNIP1-221ENST00000610874 STHQ8IWL8 128 aa12.65□□□□□ -0.38
TNIP1-221ENST00000610874 F8P00451 2351 aa12.65□□□□□ -0.38
TNIP1-221ENST00000610874 COX7A2LO14548 114 aa12.64□□□□□ -0.39
TNIP1-221ENST00000610874 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
TNIP1-221ENST00000610874 TEP1Q99973 2627 aaKnown RBP12.63□□□□□ -0.39
TNIP1-221ENST00000610874 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
TNIP1-221ENST00000610874 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
TNIP1-221ENST00000610874 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
TNIP1-221ENST00000610874 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
TNIP1-221ENST00000610874 CHCHD5Q9BSY4 110 aa12.61□□□□□ -0.39
TNIP1-221ENST00000610874 Q6ZTI0 123 aa12.61□□□□□ -0.39
TNIP1-221ENST00000610874 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
TNIP1-221ENST00000610874 K7EQD1 137 aa12.6□□□□□ -0.39
TNIP1-221ENST00000610874 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
TNIP1-221ENST00000610874 SVIPQ8NHG7 77 aa12.6□□□□□ -0.39
TNIP1-221ENST00000610874 SPATA3Q8NHX4 192 aa12.6□□□□□ -0.39
TNIP1-221ENST00000610874 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
TNIP1-221ENST00000610874 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
TNIP1-221ENST00000610874 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
TNIP1-221ENST00000610874 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
TNIP1-221ENST00000610874 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
TNIP1-221ENST00000610874 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
TNIP1-221ENST00000610874 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
TNIP1-221ENST00000610874 F5H768 121 aa12.58□□□□□ -0.4
TNIP1-221ENST00000610874 PF4P02776 101 aa12.58□□□□□ -0.4
TNIP1-221ENST00000610874 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
TNIP1-221ENST00000610874 FAM218AQ96MZ4 157 aa12.57□□□□□ -0.4
TNIP1-221ENST00000610874 TRBV7-7A0A0K0K1E9 115 aa12.57□□□□□ -0.4
TNIP1-221ENST00000610874 BAALC-AS2P0C853 105 aa12.57□□□□□ -0.4
TNIP1-221ENST00000610874 UBE2L6O14933 153 aa12.56□□□□□ -0.4
TNIP1-221ENST00000610874 CSDC2Q9Y534 153 aaKnown RBP12.56□□□□□ -0.4
TNIP1-221ENST00000610874 IGKV3OR2-268A0A0C4DH90 116 aa12.56□□□□□ -0.4
TNIP1-221ENST00000610874 FAM19A3Q7Z5A8 133 aa12.56□□□□□ -0.4
TNIP1-221ENST00000610874 SMCR5Q8TEV8 140 aa12.56□□□□□ -0.4
TNIP1-221ENST00000610874 TRBV10-1A0A0K0K1A3 114 aa12.55□□□□□ -0.4
TNIP1-221ENST00000610874 FAM236AA0A1B0GUQ0 79 aa12.55□□□□□ -0.4
TNIP1-221ENST00000610874 FAM236BA0A1B0GV22 79 aa12.55□□□□□ -0.4
TNIP1-221ENST00000610874 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
TNIP1-221ENST00000610874 Q9HAA7 133 aa12.55□□□□□ -0.4
TNIP1-221ENST00000610874 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
TNIP1-221ENST00000610874 HERV-K104P63124 156 aa12.54□□□□□ -0.4
TNIP1-221ENST00000610874 C3orf56Q8N813 242 aa12.54□□□□□ -0.4
TNIP1-221ENST00000610874 TOMM7Q9P0U1 55 aa12.54□□□□□ -0.4
TNIP1-221ENST00000610874 TRACP01848 142 aa12.54□□□□□ -0.4
TNIP1-221ENST00000610874 ACYP1P07311 99 aa12.54□□□□□ -0.4
TNIP1-221ENST00000610874 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
TNIP1-221ENST00000610874 TMEM243Q9BU79 118 aa12.52□□□□□ -0.4
TNIP1-221ENST00000610874 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.4
TNIP1-221ENST00000610874 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.41
TNIP1-221ENST00000610874 MIR7-3HGQ8N6C7 128 aa12.51□□□□□ -0.41
TNIP1-221ENST00000610874 CRPP02741 224 aa12.51□□□□□ -0.41
TNIP1-221ENST00000610874 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
TNIP1-221ENST00000610874 SMIM20Q8N5G0 67 aa12.5□□□□□ -0.41
TNIP1-221ENST00000610874 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
TNIP1-221ENST00000610874 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
TNIP1-221ENST00000610874 LINC00337Q8N6G1 96 aa12.49□□□□□ -0.41
TNIP1-221ENST00000610874 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
TNIP1-221ENST00000610874 COX7B2Q8TF08 81 aa12.49□□□□□ -0.41
TNIP1-221ENST00000610874 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
TNIP1-221ENST00000610874 TRAV13-2A0A0B4J235 113 aa12.48□□□□□ -0.41
TNIP1-221ENST00000610874 LINC00643Q86TS7 51 aa12.48□□□□□ -0.41
TNIP1-221ENST00000610874 LINC00158P58513 81 aa12.47□□□□□ -0.41
TNIP1-221ENST00000610874 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
TNIP1-221ENST00000610874 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
TNIP1-221ENST00000610874 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
TNIP1-221ENST00000610874 IMUPQ9GZP8 106 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms