RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
CTSA-214ENST00000606788 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
CTSA-214ENST00000606788 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
CTSA-214ENST00000606788 RBX1P62877 108 aa11.16□□□□□ -0.62
CTSA-214ENST00000606788 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
CTSA-214ENST00000606788 CITED1Q99966 193 aa11.16□□□□□ -0.62
CTSA-214ENST00000606788 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
CTSA-214ENST00000606788 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
CTSA-214ENST00000606788 RETNQ9HD89 108 aa11.15□□□□□ -0.62
CTSA-214ENST00000606788 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
CTSA-214ENST00000606788 TMEM238C9JI98 176 aa11.15□□□□□ -0.62
CTSA-214ENST00000606788 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.63
CTSA-214ENST00000606788 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.63
CTSA-214ENST00000606788 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.63
CTSA-214ENST00000606788 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
CTSA-214ENST00000606788 PRO1854Q9UHT4 67 aa11.14□□□□□ -0.63
CTSA-214ENST00000606788 IGHV4-30-4P0DP06 118 aa11.13□□□□□ -0.63
CTSA-214ENST00000606788 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
CTSA-214ENST00000606788 LITAFQ99732 161 aa11.13□□□□□ -0.63
CTSA-214ENST00000606788 SPANXB1Q9NS25 103 aaPredicted RBP11.13□□□□□ -0.63
CTSA-214ENST00000606788 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
CTSA-214ENST00000606788 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
CTSA-214ENST00000606788 F5H768 121 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 PAX4O43316 350 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 HERVK_113P63121 156 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 IGLV10-54A0A075B6I4 117 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 CYSRT1A8MQ03 144 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 ANK2Q01484 3957 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 XCL1P47992 114 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 INSL3P51460 131 aa11.12□□□□□ -0.63
CTSA-214ENST00000606788 TRAV26-1A0A087WT03 109 aa11.11□□□□□ -0.63
CTSA-214ENST00000606788 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
CTSA-214ENST00000606788 DAD1P61803 113 aa11.11□□□□□ -0.63
CTSA-214ENST00000606788 TCL1BO95988 128 aa11.11□□□□□ -0.63
CTSA-214ENST00000606788 CRYBA4P53673 196 aa11.11□□□□□ -0.63
CTSA-214ENST00000606788 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
CTSA-214ENST00000606788 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
CTSA-214ENST00000606788 TIRAPP58753 221 aa11.1□□□□□ -0.63
CTSA-214ENST00000606788 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
CTSA-214ENST00000606788 K7ERU9 68 aa11.08□□□□□ -0.64
CTSA-214ENST00000606788 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
CTSA-214ENST00000606788 IGHV3-33P01772 117 aa11.07□□□□□ -0.64
CTSA-214ENST00000606788 APOC4P55056 127 aa11.07□□□□□ -0.64
CTSA-214ENST00000606788 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
CTSA-214ENST00000606788 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
CTSA-214ENST00000606788 MIAQ16674 131 aa11.06□□□□□ -0.64
CTSA-214ENST00000606788 C3orf56Q8N813 242 aa11.06□□□□□ -0.64
CTSA-214ENST00000606788 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
CTSA-214ENST00000606788 PFN2P35080 140 aa11.06□□□□□ -0.64
CTSA-214ENST00000606788 KRTAP10-11P60412 298 aa11.05□□□□□ -0.64
CTSA-214ENST00000606788 NDUFA1O15239 70 aa11.05□□□□□ -0.64
CTSA-214ENST00000606788 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
CTSA-214ENST00000606788 SMCPP49901 116 aaPredicted RBP11.04□□□□□ -0.64
CTSA-214ENST00000606788 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
CTSA-214ENST00000606788 IGLV5-39A0A0G2JS06 123 aa11.04□□□□□ -0.64
CTSA-214ENST00000606788 LINC00269Q8N2A0 174 aa11.04□□□□□ -0.64
CTSA-214ENST00000606788 Q8NAQ8 132 aa11.04□□□□□ -0.64
CTSA-214ENST00000606788 SVIPQ8NHG7 77 aa11.03□□□□□ -0.64
CTSA-214ENST00000606788 CLEC2BQ92478 149 aa11.03□□□□□ -0.64
CTSA-214ENST00000606788 PRO0461Q9UI25 63 aa11.03□□□□□ -0.64
CTSA-214ENST00000606788 TRIAP1O43715 76 aa11.03□□□□□ -0.64
CTSA-214ENST00000606788 ANGP03950 147 aaKnown RBP11.03□□□□□ -0.64
CTSA-214ENST00000606788 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
CTSA-214ENST00000606788 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
CTSA-214ENST00000606788 C9JAW5 83 aa11.02□□□□□ -0.65
CTSA-214ENST00000606788 CIDEAO60543 219 aa11.02□□□□□ -0.65
CTSA-214ENST00000606788 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
CTSA-214ENST00000606788 LINC00308Q8TCZ7 52 aa11.02□□□□□ -0.65
CTSA-214ENST00000606788 LINC00526Q96FQ7 95 aa11.02□□□□□ -0.65
CTSA-214ENST00000606788 LINC00959A0A1B0GUT2 108 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 F8W1H4 67 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 LINC00158P58513 81 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 LINC00612Q8N6U2 182 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 COX7B2Q8TF08 81 aa11.01□□□□□ -0.65
CTSA-214ENST00000606788 TRAV16A0A0A6YYK6 109 aaPredicted RBP11□□□□□ -0.65
CTSA-214ENST00000606788 ATP5G1P05496 136 aa11□□□□□ -0.65
CTSA-214ENST00000606788 WFDC9Q8NEX5 89 aa11□□□□□ -0.65
CTSA-214ENST00000606788 LYRM9A8MSI8 78 aa11□□□□□ -0.65
CTSA-214ENST00000606788 G3V4G9 280 aa11□□□□□ -0.65
CTSA-214ENST00000606788 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 A0A0B4J2C4 111 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 SMAGPQ0VAQ4 97 aa10.99□□□□□ -0.65
CTSA-214ENST00000606788 SPART-AS1P0CW21 52 aa10.98□□□□□ -0.65
CTSA-214ENST00000606788 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
CTSA-214ENST00000606788 RNF183Q96D59 192 aa10.98□□□□□ -0.65
CTSA-214ENST00000606788 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
CTSA-214ENST00000606788 MIFP14174 115 aa10.95□□□□□ -0.66
CTSA-214ENST00000606788 MRAPQ8TCY5 172 aa10.95□□□□□ -0.66
CTSA-214ENST00000606788 KLK12Q9UKR0 248 aa10.95□□□□□ -0.66
CTSA-214ENST00000606788 SS18Q15532 418 aa10.94□□□□□ -0.66
CTSA-214ENST00000606788 LYRM7Q5U5X0 104 aa10.94□□□□□ -0.66
CTSA-214ENST00000606788 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
CTSA-214ENST00000606788 H7C423 109 aa10.93□□□□□ -0.66
CTSA-214ENST00000606788 SLC25A20O43772 301 aa10.93□□□□□ -0.66
CTSA-214ENST00000606788 Q6ZTC4 211 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms