RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
SEH1L-208ENST00000590843 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
SEH1L-208ENST00000590843 CRIP3Q6Q6R5 217 aa8.11□□□□□ -1.11
SEH1L-208ENST00000590843 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
SEH1L-208ENST00000590843 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 CELA1Q9UNI1 258 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
SEH1L-208ENST00000590843 COX6A2Q02221 97 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 NUPR1O60356 82 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
SEH1L-208ENST00000590843 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.11
SEH1L-208ENST00000590843 ESRGQ1W209 222 aa8.09□□□□□ -1.11
SEH1L-208ENST00000590843 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
SEH1L-208ENST00000590843 CYSRT1A8MQ03 144 aa8.09□□□□□ -1.11
SEH1L-208ENST00000590843 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
SEH1L-208ENST00000590843 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
SEH1L-208ENST00000590843 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
SEH1L-208ENST00000590843 IGKV2-28A0A075B6P5 120 aa8.08□□□□□ -1.12
SEH1L-208ENST00000590843 IGKV2D-28P01615 120 aa8.08□□□□□ -1.12
SEH1L-208ENST00000590843 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
SEH1L-208ENST00000590843 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 C11orf1Q9H5F2 150 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 CFC1P0CG37 223 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 CRYGAP11844 174 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 KRTAP1-1Q07627 177 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 SEC61GP60059 68 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 Q8NAQ8 132 aa8.07□□□□□ -1.12
SEH1L-208ENST00000590843 Q6JHZ5 121 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 ARHGAP32A7KAX9 2087 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 KIF25-AS1Q9Y6Z4 181 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 X6R8D5 127 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 A0A1B0GX51 115 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 Q6ZPA2 131 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 ACANP16112 2415 aa8.06□□□□□ -1.12
SEH1L-208ENST00000590843 E9PLD3 99 aa8.05□□□□□ -1.12
SEH1L-208ENST00000590843 FOXI1Q12951 378 aa8.05□□□□□ -1.12
SEH1L-208ENST00000590843 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
SEH1L-208ENST00000590843 MRPL52Q86TS9 123 aaKnown RBP8.05□□□□□ -1.12
SEH1L-208ENST00000590843 LINC00476Q8WZB0 136 aa8.04□□□□□ -1.12
SEH1L-208ENST00000590843 PRYO14603 147 aa8.04□□□□□ -1.12
SEH1L-208ENST00000590843 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
SEH1L-208ENST00000590843 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
SEH1L-208ENST00000590843 LINC00588Q9Y4M8 146 aa8.03□□□□□ -1.12
SEH1L-208ENST00000590843 LST1O00453 97 aa8.03□□□□□ -1.12
SEH1L-208ENST00000590843 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
SEH1L-208ENST00000590843 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 TSHBP01222 138 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
SEH1L-208ENST00000590843 CASC10Q5T4H9 136 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 H3BMG7 143 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 COX8AP10176 69 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 PRR9Q5T870 116 aa8.02□□□□□ -1.13
SEH1L-208ENST00000590843 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
SEH1L-208ENST00000590843 CEND1Q8N111 149 aa8.01□□□□□ -1.13
SEH1L-208ENST00000590843 PRR4Q16378 134 aa8□□□□□ -1.13
SEH1L-208ENST00000590843 DNAH10OSP0CZ25 163 aa8□□□□□ -1.13
SEH1L-208ENST00000590843 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
SEH1L-208ENST00000590843 HIST3H2BBQ8N257 126 aa7.99□□□□□ -1.13
SEH1L-208ENST00000590843 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
SEH1L-208ENST00000590843 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
SEH1L-208ENST00000590843 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
SEH1L-208ENST00000590843 PRM2P04554 102 aa7.98□□□□□ -1.13
SEH1L-208ENST00000590843 IGLC3P0DOY3 106 aa7.98□□□□□ -1.13
SEH1L-208ENST00000590843 EXPH5Q8NEV8 1989 aa7.98□□□□□ -1.13
SEH1L-208ENST00000590843 TIMM17BO60830 172 aa7.98□□□□□ -1.13
SEH1L-208ENST00000590843 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
SEH1L-208ENST00000590843 NAA38Q9BRA0 125 aaKnown RBP7.97□□□□□ -1.13
SEH1L-208ENST00000590843 HRCT1Q6UXD1 115 aa7.97□□□□□ -1.13
SEH1L-208ENST00000590843 DAND5Q8N907 189 aa7.97□□□□□ -1.13
SEH1L-208ENST00000590843 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
SEH1L-208ENST00000590843 MRPS12O15235 138 aaKnown RBP7.96□□□□□ -1.13
SEH1L-208ENST00000590843 COLCA2A8K830 154 aa7.96□□□□□ -1.13
SEH1L-208ENST00000590843 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
SEH1L-208ENST00000590843 B5MCH6 92 aa7.96□□□□□ -1.14
SEH1L-208ENST00000590843 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.14
SEH1L-208ENST00000590843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.95□□□□□ -1.14
SEH1L-208ENST00000590843 LCE6AA0A183 80 aa7.95□□□□□ -1.14
SEH1L-208ENST00000590843 NRACQ8N912 160 aa7.95□□□□□ -1.14
SEH1L-208ENST00000590843 ACYP1P07311 99 aa7.95□□□□□ -1.14
SEH1L-208ENST00000590843 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
SEH1L-208ENST00000590843 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
SEH1L-208ENST00000590843 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
SEH1L-208ENST00000590843 BPY2O14599 106 aa7.94□□□□□ -1.14
SEH1L-208ENST00000590843 BAHCC1Q9P281 2608 aa7.94□□□□□ -1.14
SEH1L-208ENST00000590843 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
SEH1L-208ENST00000590843 C6orf99Q4VX62 202 aa7.94□□□□□ -1.14
SEH1L-208ENST00000590843 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
SEH1L-208ENST00000590843 KRTAP10-3P60369 221 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms