RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	UBE2V1	Q13404	147 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	TMEM97	Q5BJF2	176 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	LCE4A	Q5TA78	99 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	RNASE8	Q8TDE3	154 aa	Known RBP	2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	RASL10A	Q92737	203 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	RPL39L	Q96EH5	51 aa	Known RBP	2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	LINC00477	Q96M19	166 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	KRTAP9-8	Q9BYQ0	159 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	NXT2	Q9NPJ8	142 aa	Known RBP	2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	HHLA3	Q9XRX5	114 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	LENEP	Q9Y5L5	61 aa		2.96	□□□□□ -1.94
MSI2-216	ENST00000582772	IGLV1-50	A0A075B6I6	118 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	TRAV21	A0A0B4J279	112 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	SMIM17	P0DL12	118 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	RNASE4	P34096	147 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	PTTG1IP	P53801	180 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	ZNF415	Q09FC8	603 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	LINC01556	Q5JQF7	62 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	SPANXN1	Q5VSR9	72 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	AMMECR1L	Q6DCA0	310 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	NAA38	Q9BRA0	125 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	SMIM2	Q9BVW6	85 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	JPT2	Q9H910	190 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772		Q9HAA7	133 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772	PLAC8	Q9NZF1	115 aa		2.95	□□□□□ -1.94
MSI2-216	ENST00000582772		A0A087WX48	190 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	C7orf71	A4D174	169 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	KLLN	B2CW77	178 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772		M0R381	172 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	ATP5L	O75964	103 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	DPM2	O94777	84 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	IGKC	P01834	107 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	PRSS1	P07477	247 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	NMU	P48645	174 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	SEC61B	P60468	96 aa	Known RBP	2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	RBX1	P62877	108 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	HSD52	Q0P140	79 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	VAMP3	Q15836	100 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	UFSP1	Q6NVU6	142 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	NEGR1	Q7Z3B1	354 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	C14orf178	Q8N769	122 aa	Predicted RBP	2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	MRAP2	Q96G30	205 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	MRPL35	Q9NZE8	188 aa	Known RBP	2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	ICOS	Q9Y6W8	199 aa		2.94	□□□□□ -1.94
MSI2-216	ENST00000582772	TRBV7-9	A0A0J9YWB2	115 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	C9orf118	A6NHY6	69 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772		H3BRM9	83 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772		K7EMI3	77 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	MGP	P08493	103 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	FXYD2	P54710	66 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	SUMO2	P61956	95 aa	Known RBP	2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	SEC11A	P67812	179 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	ZC2HC1B	Q5TFG8	222 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	SMIM15	Q7Z3B0	74 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	C9orf163	Q8N9P6	203 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	TOMM6	Q96B49	74 aa		2.93	□□□□□ -1.94
MSI2-216	ENST00000582772	TRBV25-1	A0A075B6N4	114 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772		A0A087WYN8	130 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	TRAV12-1	A0A0B4J245	112 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	TRAV12-3	A0A0B4J271	114 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	IGHV3-16	A0A0C4DH30	117 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772		A0A0J9YX75	114 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772		H3BUT2	72 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772		K7ERJ3	54 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	TSHB	P01222	138 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	IGKV3-20	P01619	116 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	S100A4	P26447	101 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	POLR2K	P53803	58 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	PSMG4	Q5JS54	123 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	SUMO4	Q6EEV6	95 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	KRTAP5-7	Q6L8G8	165 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	AMTN	Q6UX39	209 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	SDIM1	Q6ZPB5	146 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	NEXN-AS1	Q8NBZ9	246 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	OR4C5	Q8NGB2	326 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	BAALC	Q8WXS3	180 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	RAB37	Q96AX2	223 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	C9orf85	Q96MD7	179 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	SCGB3A1	Q96QR1	104 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	C20orf78	Q9BR46	151 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	HIGD1B	Q9P298	99 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	PHLDA3	Q9Y5J5	127 aa		2.92	□□□□□ -1.94
MSI2-216	ENST00000582772	IGLV4-69	A0A075B6H9	119 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	TRBV7-3	A0A075B6L6	115 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	TRAV12-2	A0A075B6T6	113 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772		A0A087WWL8	130 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	IGHV3-38	A0A0C4DH36	116 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772		A6NDN8	102 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772		A8MTW9	85 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772		F8VRH5	84 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772		K7EP34	96 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	DUSP14	O95147	198 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	RPL13A	P40429	203 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	ID1	P41134	155 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	RPL39	P62891	51 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	RPL32	P62910	135 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	ORMDL2	Q53FV1	153 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	KRTAP5-10	Q6L8G5	202 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	C2orf66	Q6UXQ4	117 aa		2.91	□□□□□ -1.94
MSI2-216	ENST00000582772	ATP6V0E2	Q8NHE4	81 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms