RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 DAD1P61803 113 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 KRTAP24-1Q3LI83 254 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 A0A096LPF7 62 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 OCIAD2Q56VL3 154 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 Q8NAQ8 132 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 Q9H8V8 135 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.81□□□□□ -0.84
VPS33B-208ENST00000574755 F5H768 121 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 MIAQ16674 131 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 OXLD1Q5BKU9 147 aa9.81□□□□□ -0.84
VPS33B-208ENST00000574755 RNF183Q96D59 192 aa9.8□□□□□ -0.84
VPS33B-208ENST00000574755 A0A0B4J2C4 111 aa9.8□□□□□ -0.84
VPS33B-208ENST00000574755 NPC2P61916 151 aa9.8□□□□□ -0.84
VPS33B-208ENST00000574755 CELA1Q9UNI1 258 aa9.8□□□□□ -0.84
VPS33B-208ENST00000574755 TMEM262E9PQX1 116 aa9.79□□□□□ -0.84
VPS33B-208ENST00000574755 TIMM17BO60830 172 aa9.79□□□□□ -0.84
VPS33B-208ENST00000574755 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
VPS33B-208ENST00000574755 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
VPS33B-208ENST00000574755 EIF4EBP3O60516 100 aaPredicted RBP9.79□□□□□ -0.84
VPS33B-208ENST00000574755 ATP5G1P05496 136 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 C3orf56Q8N813 242 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 DAND5Q8N907 189 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 F8W1H4 67 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 PRIMA1Q86XR5 153 aa9.78□□□□□ -0.84
VPS33B-208ENST00000574755 H7C2G1 150 aa9.77□□□□□ -0.85
VPS33B-208ENST00000574755 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.85
VPS33B-208ENST00000574755 K7ERU9 68 aa9.77□□□□□ -0.85
VPS33B-208ENST00000574755 IGHV3-33P01772 117 aa9.77□□□□□ -0.85
VPS33B-208ENST00000574755 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
VPS33B-208ENST00000574755 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
VPS33B-208ENST00000574755 PSMB2P49721 201 aa9.76□□□□□ -0.85
VPS33B-208ENST00000574755 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
VPS33B-208ENST00000574755 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 RBX1P62877 108 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 Q1RN00 199 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 IFITM1P13164 125 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 HTN3P15516 51 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 KRTAP10-11P60412 298 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 RNF151Q2KHN1 245 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 MEIG1Q5JSS6 88 aa9.75□□□□□ -0.85
VPS33B-208ENST00000574755 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 LINC00959A0A1B0GUT2 108 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 WFDC2Q14508 124 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 STAB1Q9NY15 2570 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 HERV-K104P63124 156 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
VPS33B-208ENST00000574755 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
VPS33B-208ENST00000574755 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
VPS33B-208ENST00000574755 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
VPS33B-208ENST00000574755 SHISA2Q6UWI4 295 aa9.73□□□□□ -0.85
VPS33B-208ENST00000574755 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 TCL1BO95988 128 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 A0A087WZ39 114 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 SS18Q15532 418 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
VPS33B-208ENST00000574755 XCL1P47992 114 aa9.71□□□□□ -0.85
VPS33B-208ENST00000574755 EGFEM1PQ0D2K5 195 aa9.71□□□□□ -0.86
VPS33B-208ENST00000574755 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
VPS33B-208ENST00000574755 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
VPS33B-208ENST00000574755 MAST4O15021 2626 aa9.7□□□□□ -0.86
VPS33B-208ENST00000574755 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
VPS33B-208ENST00000574755 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
VPS33B-208ENST00000574755 RETNQ9HD89 108 aa9.7□□□□□ -0.86
VPS33B-208ENST00000574755 VPS25Q9BRG1 176 aa9.69□□□□□ -0.86
VPS33B-208ENST00000574755 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
VPS33B-208ENST00000574755 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
VPS33B-208ENST00000574755 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
VPS33B-208ENST00000574755 G3V4G9 280 aa9.68□□□□□ -0.86
VPS33B-208ENST00000574755 ANGP03950 147 aaKnown RBP9.68□□□□□ -0.86
VPS33B-208ENST00000574755 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
VPS33B-208ENST00000574755 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
VPS33B-208ENST00000574755 TRIAP1O43715 76 aa9.67□□□□□ -0.86
VPS33B-208ENST00000574755 SOSTDC1Q6X4U4 206 aa9.67□□□□□ -0.86
VPS33B-208ENST00000574755 Q8N3U1 123 aa9.67□□□□□ -0.86
VPS33B-208ENST00000574755 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
VPS33B-208ENST00000574755 ANK2Q01484 3957 aa9.66□□□□□ -0.86
VPS33B-208ENST00000574755 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
VPS33B-208ENST00000574755 REG3AQ06141 175 aa9.65□□□□□ -0.86
VPS33B-208ENST00000574755 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
VPS33B-208ENST00000574755 LELP1Q5T871 98 aa9.65□□□□□ -0.86
VPS33B-208ENST00000574755 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.87
VPS33B-208ENST00000574755 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
VPS33B-208ENST00000574755 COX6CP09669 75 aa9.64□□□□□ -0.87
VPS33B-208ENST00000574755 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
VPS33B-208ENST00000574755 LINC00158P58513 81 aa9.64□□□□□ -0.87
VPS33B-208ENST00000574755 ATXN8Q156A1 80 aa9.64□□□□□ -0.87
VPS33B-208ENST00000574755 CMYA5Q8N3K9 4069 aa9.63□□□□□ -0.87
VPS33B-208ENST00000574755 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms