RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 GAGE4Q13068 117 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 COX7A2LO14548 114 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
PCDHB19P-201ENST00000570871 C1orf158Q8N1D5 194 aa12.06□□□□□ -0.48
PCDHB19P-201ENST00000570871 ODF3L2Q3SX64 289 aa12.06□□□□□ -0.48
PCDHB19P-201ENST00000570871 SHISA2Q6UWI4 295 aa12.06□□□□□ -0.48
PCDHB19P-201ENST00000570871 PRIMA1Q86XR5 153 aa12.06□□□□□ -0.48
PCDHB19P-201ENST00000570871 MEIG1Q5JSS6 88 aa12.05□□□□□ -0.48
PCDHB19P-201ENST00000570871 IL17DQ8TAD2 202 aa12.05□□□□□ -0.48
PCDHB19P-201ENST00000570871 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
PCDHB19P-201ENST00000570871 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
PCDHB19P-201ENST00000570871 F5H768 121 aa12.04□□□□□ -0.48
PCDHB19P-201ENST00000570871 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
PCDHB19P-201ENST00000570871 K7EQD1 137 aa12.04□□□□□ -0.48
PCDHB19P-201ENST00000570871 Q6ZTI0 123 aa12.04□□□□□ -0.48
PCDHB19P-201ENST00000570871 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
PCDHB19P-201ENST00000570871 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
PCDHB19P-201ENST00000570871 STHQ8IWL8 128 aa12.03□□□□□ -0.48
PCDHB19P-201ENST00000570871 COPS9Q8WXC6 57 aa12.03□□□□□ -0.48
PCDHB19P-201ENST00000570871 DAZ2Q13117 558 aaKnown RBP12.01□□□□□ -0.49
PCDHB19P-201ENST00000570871 DAZ4Q86SG3 579 aaKnown RBP12.01□□□□□ -0.49
PCDHB19P-201ENST00000570871 DAZ3Q9NR90 486 aaKnown RBP12.01□□□□□ -0.49
PCDHB19P-201ENST00000570871 SETXQ7Z333 2677 aaKnown RBP12.01□□□□□ -0.49
PCDHB19P-201ENST00000570871 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
PCDHB19P-201ENST00000570871 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
PCDHB19P-201ENST00000570871 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
PCDHB19P-201ENST00000570871 HERV-K104P63124 156 aa11.99□□□□□ -0.49
PCDHB19P-201ENST00000570871 SVIPQ8NHG7 77 aa11.99□□□□□ -0.49
PCDHB19P-201ENST00000570871 FAM218AQ96MZ4 157 aa11.99□□□□□ -0.49
PCDHB19P-201ENST00000570871 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.49
PCDHB19P-201ENST00000570871 TRACP01848 142 aa11.98□□□□□ -0.49
PCDHB19P-201ENST00000570871 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
PCDHB19P-201ENST00000570871 HIVEP1P15822 2718 aa11.98□□□□□ -0.49
PCDHB19P-201ENST00000570871 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
PCDHB19P-201ENST00000570871 ACYP1P07311 99 aa11.97□□□□□ -0.49
PCDHB19P-201ENST00000570871 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
PCDHB19P-201ENST00000570871 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
PCDHB19P-201ENST00000570871 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
PCDHB19P-201ENST00000570871 KRTAP1-1Q07627 177 aa11.96□□□□□ -0.49
PCDHB19P-201ENST00000570871 UBE2L6O14933 153 aa11.96□□□□□ -0.5
PCDHB19P-201ENST00000570871 C11orf44Q8N8P7 122 aa11.96□□□□□ -0.5
PCDHB19P-201ENST00000570871 SMR3AQ99954 134 aa11.96□□□□□ -0.5
PCDHB19P-201ENST00000570871 TMEM243Q9BU79 118 aa11.96□□□□□ -0.5
PCDHB19P-201ENST00000570871 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
PCDHB19P-201ENST00000570871 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
PCDHB19P-201ENST00000570871 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
PCDHB19P-201ENST00000570871 PPDPFQ9H3Y8 114 aa11.93□□□□□ -0.5
PCDHB19P-201ENST00000570871 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 MIR7-3HGQ8N6C7 128 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 LINC00337Q8N6G1 96 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 Q9HAA7 133 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
PCDHB19P-201ENST00000570871 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 CRPP02741 224 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 IGKV2-28A0A075B6P5 120 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 IGKV2D-28P01615 120 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 GIG44P09565 113 aaPredicted RBP11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 IMUPQ9GZP8 106 aa11.91□□□□□ -0.5
PCDHB19P-201ENST00000570871 PF4P02776 101 aa11.9□□□□□ -0.5
PCDHB19P-201ENST00000570871 FAM222AQ5U5X8 452 aa11.9□□□□□ -0.5
PCDHB19P-201ENST00000570871 LINC00643Q86TS7 51 aa11.9□□□□□ -0.5
PCDHB19P-201ENST00000570871 HIVEP2P31629 2446 aa11.9□□□□□ -0.5
PCDHB19P-201ENST00000570871 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.51
PCDHB19P-201ENST00000570871 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.51
PCDHB19P-201ENST00000570871 SND1-IT1Q9HBX3 110 aa11.9□□□□□ -0.51
PCDHB19P-201ENST00000570871 TRGV2A0A075B6R0 118 aa11.89□□□□□ -0.51
PCDHB19P-201ENST00000570871 CCL24O00175 119 aa11.89□□□□□ -0.51
PCDHB19P-201ENST00000570871 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
PCDHB19P-201ENST00000570871 MALP21145 153 aa11.88□□□□□ -0.51
PCDHB19P-201ENST00000570871 WFDC10AQ9H1F0 79 aa11.87□□□□□ -0.51
PCDHB19P-201ENST00000570871 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
PCDHB19P-201ENST00000570871 LINC00158P58513 81 aa11.87□□□□□ -0.51
PCDHB19P-201ENST00000570871 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 GAGE2AQ6NT46 116 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 SMIM11BQ8TCY0 68 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 TRBV6-4A0A1B0GX49 114 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 C16orf74Q96GX8 76 aa11.86□□□□□ -0.51
PCDHB19P-201ENST00000570871 A0A087WYN8 130 aa11.85□□□□□ -0.51
PCDHB19P-201ENST00000570871 CCL18P55774 89 aa11.85□□□□□ -0.51
PCDHB19P-201ENST00000570871 IGHV3OR16-9A0A0B4J2B5 98 aa11.85□□□□□ -0.51
PCDHB19P-201ENST00000570871 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
PCDHB19P-201ENST00000570871 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
PCDHB19P-201ENST00000570871 DNAJC9-AS1A6NH13 148 aa11.84□□□□□ -0.51
PCDHB19P-201ENST00000570871 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
PCDHB19P-201ENST00000570871 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.52
PCDHB19P-201ENST00000570871 TMEM86BQ8N661 226 aa11.83□□□□□ -0.52
PCDHB19P-201ENST00000570871 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
PCDHB19P-201ENST00000570871 C9orf129Q5T035 196 aaKnown RBP11.83□□□□□ -0.52
PCDHB19P-201ENST00000570871 DNAL4O96015 105 aa11.82□□□□□ -0.52
PCDHB19P-201ENST00000570871 PFN2P35080 140 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms