RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 SS18Q15532 418 aa13.18□□□□□ -0.3
PKD1-230ENST00000565639 LINC00269Q8N2A0 174 aa13.18□□□□□ -0.3
PKD1-230ENST00000565639 Q8N3U1 123 aa13.18□□□□□ -0.3
PKD1-230ENST00000565639 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
PKD1-230ENST00000565639 SNHG12Q9BXW3 62 aa13.17□□□□□ -0.3
PKD1-230ENST00000565639 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
PKD1-230ENST00000565639 IGLV5-39A0A0G2JS06 123 aa13.16□□□□□ -0.3
PKD1-230ENST00000565639 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
PKD1-230ENST00000565639 REG3AQ06141 175 aa13.16□□□□□ -0.3
PKD1-230ENST00000565639 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
PKD1-230ENST00000565639 SMIM1B2RUZ4 78 aa13.14□□□□□ -0.31
PKD1-230ENST00000565639 IGLL5B9A064 214 aa13.14□□□□□ -0.31
PKD1-230ENST00000565639 EREGO14944 169 aa13.14□□□□□ -0.31
PKD1-230ENST00000565639 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
PKD1-230ENST00000565639 PRR34Q9NV39 138 aa13.14□□□□□ -0.31
PKD1-230ENST00000565639 HSD52Q0P140 79 aa13.12□□□□□ -0.31
PKD1-230ENST00000565639 LBHQ53QV2 105 aaPredicted RBP13.12□□□□□ -0.31
PKD1-230ENST00000565639 A0A087WZ39 114 aa13.12□□□□□ -0.31
PKD1-230ENST00000565639 HINT1P49773 126 aaPredicted RBP13.12□□□□□ -0.31
PKD1-230ENST00000565639 SCGB1D4Q6XE38 83 aa13.12□□□□□ -0.31
PKD1-230ENST00000565639 ZFAND6Q6FIF0 208 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 KLK12Q9UKR0 248 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 MEGF8Q7Z7M0 2845 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 LINC01556Q5JQF7 62 aa13.11□□□□□ -0.31
PKD1-230ENST00000565639 XCL1P47992 114 aa13.1□□□□□ -0.31
PKD1-230ENST00000565639 CD164L2Q6UWJ8 174 aa13.1□□□□□ -0.31
PKD1-230ENST00000565639 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
PKD1-230ENST00000565639 NDUFA12Q9UI09 145 aa13.1□□□□□ -0.31
PKD1-230ENST00000565639 CCL18P55774 89 aa13.09□□□□□ -0.31
PKD1-230ENST00000565639 BATFQ16520 125 aa13.09□□□□□ -0.31
PKD1-230ENST00000565639 TAL2Q16559 108 aa13.09□□□□□ -0.31
PKD1-230ENST00000565639 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
PKD1-230ENST00000565639 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
PKD1-230ENST00000565639 ENHOQ6UWT2 76 aa13.08□□□□□ -0.32
PKD1-230ENST00000565639 LINC00588Q9Y4M8 146 aa13.08□□□□□ -0.32
PKD1-230ENST00000565639 C5orf38Q86SI9 138 aa13.07□□□□□ -0.32
PKD1-230ENST00000565639 C10orf126Q8N4M7 172 aa13.07□□□□□ -0.32
PKD1-230ENST00000565639 NDUFA1O15239 70 aa13.07□□□□□ -0.32
PKD1-230ENST00000565639 CRPP02741 224 aa13.07□□□□□ -0.32
PKD1-230ENST00000565639 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
PKD1-230ENST00000565639 PRKDCP78527 4128 aaKnown RBP13.06□□□□□ -0.32
PKD1-230ENST00000565639 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
PKD1-230ENST00000565639 IGLV10-54A0A075B6I4 117 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 MIAQ16674 131 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 UBE2WQ96B02 151 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 HIST1H4GQ99525 98 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 UPK3BQ9BT76 320 aa13.05□□□□□ -0.32
PKD1-230ENST00000565639 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
PKD1-230ENST00000565639 COX7A2LO14548 114 aa13.04□□□□□ -0.32
PKD1-230ENST00000565639 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
PKD1-230ENST00000565639 COL5A1-AS1Q5SY13 56 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 TM2D2Q9BX73 214 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 NUPR2A6NF83 97 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 FOXI1Q12951 378 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 CEND1Q8N111 149 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 APLNQ9ULZ1 77 aa13.03□□□□□ -0.32
PKD1-230ENST00000565639 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.32
PKD1-230ENST00000565639 Q9H8V8 135 aa13.02□□□□□ -0.32
PKD1-230ENST00000565639 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
PKD1-230ENST00000565639 TMEM238C9JI98 176 aa13.01□□□□□ -0.33
PKD1-230ENST00000565639 GCSHP23434 173 aa13.01□□□□□ -0.33
PKD1-230ENST00000565639 GAGE12HA6NDE8 117 aa13□□□□□ -0.33
PKD1-230ENST00000565639 HERV-K104P63124 156 aa13□□□□□ -0.33
PKD1-230ENST00000565639 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
PKD1-230ENST00000565639 TIMM17BO60830 172 aa13□□□□□ -0.33
PKD1-230ENST00000565639 TOMM7Q9P0U1 55 aa13□□□□□ -0.33
PKD1-230ENST00000565639 MALP21145 153 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 SFTA2Q6UW10 78 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 Q8IZM0 81 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 LITAFQ99732 161 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 A6NDN8 102 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 FXYD2P54710 66 aa12.98□□□□□ -0.33
PKD1-230ENST00000565639 DYNC2H1Q8NCM8 4307 aaKnown RBP12.96□□□□□ -0.33
PKD1-230ENST00000565639 APOMO95445 188 aa12.96□□□□□ -0.34
PKD1-230ENST00000565639 PRSS2P07478 247 aa12.96□□□□□ -0.34
PKD1-230ENST00000565639 PTTG1IPP53801 180 aa12.96□□□□□ -0.34
PKD1-230ENST00000565639 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.34
PKD1-230ENST00000565639 C6orf226Q5I0X4 101 aa12.96□□□□□ -0.34
PKD1-230ENST00000565639 Q6ZVH6 145 aa12.96□□□□□ -0.34
PKD1-230ENST00000565639 IBA57-AS1B1ANH7 110 aa12.95□□□□□ -0.34
PKD1-230ENST00000565639 KRTAP26-1Q6PEX3 210 aa12.95□□□□□ -0.34
PKD1-230ENST00000565639 SPANXDQ9BXN6 97 aa12.95□□□□□ -0.34
PKD1-230ENST00000565639 SPANXCQ9NY87 97 aa12.95□□□□□ -0.34
PKD1-230ENST00000565639 K7EP13 123 aa12.94□□□□□ -0.34
PKD1-230ENST00000565639 C1orf43Q9BWL3 253 aa12.94□□□□□ -0.34
PKD1-230ENST00000565639 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
PKD1-230ENST00000565639 ADAMTSL4-AS1Q5T5F5 129 aa12.93□□□□□ -0.34
PKD1-230ENST00000565639 TMEM238LA0A1B0GVL6 79 aa12.92□□□□□ -0.34
PKD1-230ENST00000565639 A6NJY4 79 aa12.92□□□□□ -0.34
PKD1-230ENST00000565639 CXCL5P42830 114 aa12.92□□□□□ -0.34
PKD1-230ENST00000565639 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
PKD1-230ENST00000565639 CFAP161Q6P656 301 aa12.91□□□□□ -0.34
PKD1-230ENST00000565639 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
PKD1-230ENST00000565639 FBN3Q75N90 2809 aa12.9□□□□□ -0.34
PKD1-230ENST00000565639 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms