RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 IGFL4Q6B9Z1 124 aa6.4□□□□□ -1.38
CDH1-205ENST00000562836 LINC00528Q8N1L1 170 aa6.4□□□□□ -1.38
CDH1-205ENST00000562836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
CDH1-205ENST00000562836 CUL9Q8IWT3 2517 aa6.4□□□□□ -1.39
CDH1-205ENST00000562836 IGHV4-4A0A075B6R2 117 aa6.4□□□□□ -1.39
CDH1-205ENST00000562836 C10orf55Q5SWW7 151 aa6.4□□□□□ -1.39
CDH1-205ENST00000562836 CSAG1Q6PB30 78 aa6.4□□□□□ -1.39
CDH1-205ENST00000562836 CACNA1EQ15878 2313 aa6.39□□□□□ -1.39
CDH1-205ENST00000562836 TRBV6-5A0A0K0K1A5 114 aa6.39□□□□□ -1.39
CDH1-205ENST00000562836 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
CDH1-205ENST00000562836 MED13LQ71F56 2210 aa6.39□□□□□ -1.39
CDH1-205ENST00000562836 Q8N9L7 120 aa6.39□□□□□ -1.39
CDH1-205ENST00000562836 IGHV1-3A0A0C4DH29 117 aa6.38□□□□□ -1.39
CDH1-205ENST00000562836 PPP1R17O96001 155 aa6.38□□□□□ -1.39
CDH1-205ENST00000562836 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
CDH1-205ENST00000562836 LPAL2Q16609 132 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 Q6ZQT0 140 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 DOPEY2Q9Y3R5 2298 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 NAV3Q8IVL0 2385 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 IGHV3-16A0A0C4DH30 117 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
CDH1-205ENST00000562836 ROMO1P60602 79 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 CELSR3Q9NYQ7 3312 aa6.37□□□□□ -1.39
CDH1-205ENST00000562836 IGLV4-3A0A075B6K6 122 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 NDUFA1O15239 70 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 SAA2P0DJI9 122 aaPredicted RBP6.36□□□□□ -1.39
CDH1-205ENST00000562836 SPINK7P58062 85 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 FAM74A4Q5TZK3 123 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 LINC01006Q8NI28 216 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 ABCA1O95477 2261 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
CDH1-205ENST00000562836 APELAP0DMC3 54 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 SPINK14Q6IE38 97 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 H3BRN7 92 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 B9D2Q9BPU9 175 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 CLPSL1A2RUU4 121 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 CGB3P0DN86 165 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 CGB7P0DN87 165 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 Q6ZR54 194 aa6.35□□□□□ -1.39
CDH1-205ENST00000562836 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
CDH1-205ENST00000562836 PDE6HQ13956 83 aa6.34□□□□□ -1.4
CDH1-205ENST00000562836 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.4
CDH1-205ENST00000562836 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
CDH1-205ENST00000562836 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
CDH1-205ENST00000562836 PRO3102Q9H379 93 aa6.33□□□□□ -1.4
CDH1-205ENST00000562836 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 C11orf71Q6IPW1 123 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 KLK9Q9UKQ9 250 aa6.32□□□□□ -1.4
CDH1-205ENST00000562836 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
CDH1-205ENST00000562836 IGHV3-49A0A0A0MS15 119 aa6.31□□□□□ -1.4
CDH1-205ENST00000562836 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CDH1-205ENST00000562836 ZDBF2Q9HCK1 2354 aa6.3□□□□□ -1.4
CDH1-205ENST00000562836 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
CDH1-205ENST00000562836 SRRM5B3KS81 715 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 NTM-AS1Q6ZSK4 140 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 ATP6V0E1O15342 81 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGKV3-15P01624 115 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGHV1-2P23083 117 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 RPL27AP46776 148 aaKnown RBP6.29□□□□□ -1.4
CDH1-205ENST00000562836 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 AHCTF1Q8WYP5 2266 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGHV4OR15-8A0A075B7B6 117 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 A0A087WW49 117 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 LOC110117498A0A087WWA1 95 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGHV3-72A0A0B4J1Y9 119 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGKV1-17P01599 117 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGLV1-47P01700 117 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
CDH1-205ENST00000562836 ASPMQ8IZT6 3477 aa6.28□□□□□ -1.4
CDH1-205ENST00000562836 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
CDH1-205ENST00000562836 LCE6AA0A183 80 aa6.28□□□□□ -1.4
CDH1-205ENST00000562836 NBEAQ8NFP9 2946 aa6.28□□□□□ -1.4
CDH1-205ENST00000562836 NDUFA4O00483 81 aa6.28□□□□□ -1.4
CDH1-205ENST00000562836 RTL8CO15255 209 aa6.28□□□□□ -1.4
CDH1-205ENST00000562836 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
CDH1-205ENST00000562836 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
CDH1-205ENST00000562836 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
CDH1-205ENST00000562836 FAM186AA6NE01 2351 aa6.27□□□□□ -1.41
CDH1-205ENST00000562836 ZNRD1Q9P1U0 126 aa6.27□□□□□ -1.41
CDH1-205ENST00000562836 ELOF1P60002 83 aaKnown RBP6.26□□□□□ -1.41
CDH1-205ENST00000562836 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
CDH1-205ENST00000562836 CNEP1R1Q8N9A8 125 aa6.26□□□□□ -1.41
CDH1-205ENST00000562836 P0C880 135 aa6.26□□□□□ -1.41
CDH1-205ENST00000562836 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
CDH1-205ENST00000562836 LINC00315P59091 139 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 DEFB123Q8N688 67 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 WFDC10AQ9H1F0 79 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 LINC00242Q5T6M2 205 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 Q9BRP9 147 aa6.25□□□□□ -1.41
CDH1-205ENST00000562836 PDE6GP18545 87 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms