RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	GAGE10	A6NGK3	116 aa		5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	IGHV3-30-3	P0DP02	117 aa		5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	APOC4	P55056	127 aa		5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	RNASE13	Q5GAN3	156 aa	Known RBP	5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	VSIG2	Q96IQ7	327 aa		5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	TMEM243	Q9BU79	118 aa		5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	GEMIN7	Q9H840	131 aa	Known RBP	5.23	□□□□□ -1.57
ZEB1-222	ENST00000561212	IGHV3-30	P01768	117 aa		5.22	□□□□□ -1.57
ZEB1-222	ENST00000561212	IGHV3-30-5	P0DP03	117 aa		5.22	□□□□□ -1.57
ZEB1-222	ENST00000561212	LOC100131303	A0A0U1RQF7	123 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	LYRM9	A8MSI8	78 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	IGLL5	B9A064	214 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	HERVK_113	P63121	156 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	C10orf126	Q8N4M7	172 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212		Q8NAQ8	132 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	RNF183	Q96D59	192 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	NAA38	Q9BRA0	125 aa	Known RBP	5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	CDC42SE2	Q9NRR3	84 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	SPCS1	Q9Y6A9	102 aa		5.21	□□□□□ -1.58
ZEB1-222	ENST00000561212	IGHV3-64	A0A075B6Q5	118 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	TRAV8-3	A0A0A6YYJ7	113 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212		A0A0J9YXY3	114 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	TMEM238	C9JI98	176 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	UBE2L6	O14933	153 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	DEFB135	Q30KP9	77 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	LINC00242	Q5T6M2	205 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	ZFAND6	Q6FIF0	208 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	TMEM101	Q96IK0	257 aa		5.2	□□□□□ -1.58
ZEB1-222	ENST00000561212	TRBV6-8	A0A0A6YYG3	113 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	IGLV5-39	A0A0G2JS06	123 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	TIMM17B	O60830	172 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	SPINK8	P0C7L1	97 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	DEFB130B	P0DP73	79 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	DEFB130A	P0DP74	79 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	CDKN2A-AS1	Q9UH64	79 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	NDUFA12	Q9UI09	145 aa		5.19	□□□□□ -1.58
ZEB1-222	ENST00000561212	DNHD1	Q96M86	4753 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	NDUFA1	O15239	70 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	LITAF	Q99732	161 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	SPANXD	Q9BXN6	97 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	SPANXC	Q9NY87	97 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	PRO0255	Q9UI72	69 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	IGHV4-28	A0A0C4DH34	117 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212		K7EIL1	84 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	CFC1B	P0CG36	223 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	CFC1	P0CG37	223 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	MIF	P14174	115 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	GYPE	P15421	78 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	RPL24	P83731	157 aa	Known RBP	5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	COX6A2	Q02221	97 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	FAM222A	Q5U5X8	452 aa		5.18	□□□□□ -1.58
ZEB1-222	ENST00000561212	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	COL7A1	Q02388	2944 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	TRAV13-1	A0A0B4J241	112 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212		A0A0B4J2C4	111 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	SMIM1	B2RUZ4	78 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212		F5H768	121 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	KRTAP21-3	Q3LHN1	58 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	ATP6V0E2	Q8NHE4	81 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	SVIP	Q8NHG7	77 aa		5.17	□□□□□ -1.58
ZEB1-222	ENST00000561212	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212		A4D1N5	150 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	APOM	O95445	188 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	TSPAN13	O95857	204 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	GAGE6	Q13070	117 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	MIA	Q16674	131 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	LYRM7	Q5U5X0	104 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	MUSTN1	Q8IVN3	82 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	CHCHD5	Q9BSY4	110 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	PRO1854	Q9UHT4	67 aa		5.16	□□□□□ -1.58
ZEB1-222	ENST00000561212	DNAH9	Q9NYC9	4486 aa		5.15	□□□□□ -1.58
ZEB1-222	ENST00000561212		A0A1B0GUV1	79 aa		5.15	□□□□□ -1.58
ZEB1-222	ENST00000561212	IFITM1	P13164	125 aa		5.15	□□□□□ -1.58
ZEB1-222	ENST00000561212	CELA1	Q9UNI1	258 aa		5.15	□□□□□ -1.58
ZEB1-222	ENST00000561212	IGLV4-60	A0A075B6I1	120 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	TRAV26-1	A0A087WT03	109 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	TEX48	A0A1B0GUV7	120 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	DEFB4A	O15263	64 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	PRB2	P02812	416 aa	Predicted RBP	5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	SPART-AS1	P0CW21	52 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	DAD1	P61803	113 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	CIRBP	Q14011	172 aa	Known RBP	5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	OCIAD2	Q56VL3	154 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	ADAMTSL4-AS1	Q5T5F5	129 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	ZNF625	Q96I27	306 aa	Predicted RBP	5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	TM2D3	Q9BRN9	247 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	PPDPF	Q9H3Y8	114 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	STAB2	Q8WWQ8	2551 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212	MEGF8	Q7Z7M0	2845 aa		5.14	□□□□□ -1.59
ZEB1-222	ENST00000561212		F8W1H4	67 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	IGHV3-33	P01772	117 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	ATP5G1	P05496	136 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	HERV-K104	P63124	156 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	LCE4A	Q5TA78	99 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	SH2D6	Q7Z4S9	175 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	COPS9	Q8WXC6	57 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	C11orf68	Q9H3H3	251 aa	Known RBP	5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212		Q9H8V8	135 aa		5.13	□□□□□ -1.59
ZEB1-222	ENST00000561212	RETN	Q9HD89	108 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms