RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ANXA2RQ3ZCQ2 193 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 PIK3CD-AS1Q5SR53 167 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 C14orf178Q8N769 122 aaPredicted RBP4.18□□□□□ -1.74
USP3-212ENST00000559276 DCANP1Q8TF63 244 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 AMELXQ99217 191 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 ANAPC13Q9BS18 74 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 PYGO1Q9Y3Y4 419 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
USP3-212ENST00000559276 A0A087WWL8 130 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 IGHV4-28A0A0C4DH34 117 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 TMEM223A0PJW6 202 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 H3BT86 120 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 RHODO00212 210 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 TIMM17BO60830 172 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 SNCGO76070 127 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 DUSP14O95147 198 aaKnown RBP4.17□□□□□ -1.74
USP3-212ENST00000559276 IGHV3-33P01772 117 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 GAGE5Q13069 117 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 GAGE6Q13070 117 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 PRR9Q5T870 116 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 SUMO4Q6EEV6 95 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 FAM159AQ6UWV7 190 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 Q6ZTC4 211 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 ANKRD29Q8N6D5 301 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 COPS9Q8WXC6 57 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 RPL39LQ96EH5 51 aaKnown RBP4.17□□□□□ -1.74
USP3-212ENST00000559276 CARD19Q96LW7 228 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 CELA1Q9UNI1 258 aa4.17□□□□□ -1.74
USP3-212ENST00000559276 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 RTL8CO15255 209 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 TSHBP01222 138 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 COX6CP09669 75 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 MIFP14174 115 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 GAGE2BQ13066 116 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 TMEM263Q8WUH6 116 aaKnown RBP4.16□□□□□ -1.74
USP3-212ENST00000559276 C20orf173Q96LM9 149 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 C9orf85Q96MD7 179 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
USP3-212ENST00000559276 C9JAW5 83 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 I3L3M4 83 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 ACYP1P07311 99 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 IFITM1P13164 125 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 LINC01620Q4KN68 170 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 STHQ8IWL8 128 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 C20orf203Q8NBC4 194 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 PTH2Q96A98 100 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
USP3-212ENST00000559276 TRGV11A0A075B6L2 103 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 TRAV10A0A0B4J240 114 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 TRAV8-4A0A0B4J246 113 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE12JA6NER3 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 H3BMM0 161 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 M0QY20 66 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE7O76087 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE12FP0CL80 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE12GP0CL81 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE12IP0CL82 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
USP3-212ENST00000559276 ZNF22P17026 224 aaPredicted RBP4.14□□□□□ -1.75
USP3-212ENST00000559276 NDUFV3P56181 108 aaKnown RBP4.14□□□□□ -1.75
USP3-212ENST00000559276 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 DEFB1P60022 68 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 MRPS36P82909 103 aaKnown RBP4.14□□□□□ -1.75
USP3-212ENST00000559276 GAGE4Q13068 117 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 ZNRF2Q8NHG8 242 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 UBE2WQ96B02 151 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 HSPG2P98160 4391 aa4.14□□□□□ -1.75
USP3-212ENST00000559276 DEFB131BA0A096LNP1 70 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 IGHV3-16A0A0C4DH30 117 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 F5H697 171 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 GNRH2O43555 120 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 ATP5G1P05496 136 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 SNRPD3P62318 126 aaKnown RBP4.13□□□□□ -1.75
USP3-212ENST00000559276 MIAQ16674 131 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 TTC32Q5I0X7 151 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 Q6ZR54 194 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
USP3-212ENST00000559276 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 IGLV4-3A0A075B6K6 122 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 IGHV1-58A0A0C4DH39 117 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 TRBV7-7A0A0K0K1E9 115 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 M0R2N4 97 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 TIRAPP58753 221 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 RPL39P62891 51 aaKnown RBP4.12□□□□□ -1.75
USP3-212ENST00000559276 ZNF56Q15929 161 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 Q1RN00 199 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 MUSTN1Q8IVN3 82 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 DNAJC30Q96LL9 226 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 XCL2Q9UBD3 114 aa4.12□□□□□ -1.75
USP3-212ENST00000559276 ICOSQ9Y6W8 199 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms