RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 IGLV3-12A0A075B6K2 115 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 PRRC2AP48634 2157 aaKnown RBP6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 PRR9Q5T870 116 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 EPOPA6NHQ4 379 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 CTSGP08311 255 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 DAZAP2Q15038 168 aaPredicted RBP6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 IGHV4-38-2P0DP08 117 aa6.52□□□□□ -1.37
GTF2A1-203ENST00000553612 NOTCH4Q99466 2003 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 NDUFA4O00483 81 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 C16orf95Q9H693 158 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 A0A0J9YX75 114 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 NTM-AS1Q6ZSK4 140 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 EP300Q09472 2414 aaPredicted RBP6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 B9D2Q9BPU9 175 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 A8MTW9 85 aa6.51□□□□□ -1.37
GTF2A1-203ENST00000553612 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 LINC01356Q8N9X3 169 aa6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 KIAA1549LQ6ZVL6 1849 aa6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
GTF2A1-203ENST00000553612 GPHB5Q86YW7 130 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 ACACAQ13085 2346 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 SEM1Q6ZVN7 128 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 Q6ZQY7 126 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 TECTAO75443 2155 aa6.49□□□□□ -1.37
GTF2A1-203ENST00000553612 NDUFB1O75438 58 aa6.48□□□□□ -1.37
GTF2A1-203ENST00000553612 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
GTF2A1-203ENST00000553612 H3BUX3 64 aa6.48□□□□□ -1.37
GTF2A1-203ENST00000553612 A0A096LNI7 61 aa6.47□□□□□ -1.37
GTF2A1-203ENST00000553612 PDE6GP18545 87 aa6.47□□□□□ -1.37
GTF2A1-203ENST00000553612 LAMA3Q16787 3333 aa6.47□□□□□ -1.37
GTF2A1-203ENST00000553612 COX6A2Q02221 97 aa6.47□□□□□ -1.37
GTF2A1-203ENST00000553612 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
GTF2A1-203ENST00000553612 TRBV10-3A0A0K0K1G6 114 aa6.46□□□□□ -1.37
GTF2A1-203ENST00000553612 PCOTHQ58A44 107 aa6.46□□□□□ -1.37
GTF2A1-203ENST00000553612 LINC00588Q9Y4M8 146 aa6.46□□□□□ -1.37
GTF2A1-203ENST00000553612 Q8N814 137 aa6.46□□□□□ -1.38
GTF2A1-203ENST00000553612 RANBP2P49792 3224 aaKnown RBP6.46□□□□□ -1.38
GTF2A1-203ENST00000553612 TRBV6-8A0A0A6YYG3 113 aa6.46□□□□□ -1.38
GTF2A1-203ENST00000553612 E7EQL1 145 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 H0Y9J4 135 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 IGKV4-1P06312 121 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 LRP4O75096 1905 aa6.45□□□□□ -1.38
GTF2A1-203ENST00000553612 WISP2O76076 250 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 IGLV11-55A0A075B6I3 123 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 Q6ZRP5 223 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 MSMPQ1L6U9 139 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 DNAH14Q0VDD8 3507 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 XAGE1AQ9HD64 81 aa6.44□□□□□ -1.38
GTF2A1-203ENST00000553612 CCL18P55774 89 aa6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 POLR2KP53803 58 aaKnown RBP6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 LINC00313P59037 77 aa6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 KAAG1Q9UBP8 84 aa6.43□□□□□ -1.38
GTF2A1-203ENST00000553612 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 MAPK1IP1LQ8NDC0 245 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 M0QY20 66 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 A8MU10 97 aa6.42□□□□□ -1.38
GTF2A1-203ENST00000553612 FSTL3O95633 263 aa6.41□□□□□ -1.38
GTF2A1-203ENST00000553612 IGHV7-81A0A0B4J1V7 117 aa6.41□□□□□ -1.38
GTF2A1-203ENST00000553612 USP34Q70CQ2 3546 aa6.41□□□□□ -1.38
GTF2A1-203ENST00000553612 PSCAO43653 123 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 LINC00575Q6W349 94 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 AMELXQ99217 191 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 Q1T7F1 81 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 MINOS1Q5TGZ0 78 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 BCE1O60756 84 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 RNF5Q99942 180 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 CFAP54Q96N23 3096 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 C5orf42Q9H799 3197 aa6.4□□□□□ -1.38
GTF2A1-203ENST00000553612 K7EQD1 137 aa6.39□□□□□ -1.39
GTF2A1-203ENST00000553612 DEFB4AO15263 64 aa6.39□□□□□ -1.39
GTF2A1-203ENST00000553612 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
GTF2A1-203ENST00000553612 COX7BP24311 80 aa6.39□□□□□ -1.39
GTF2A1-203ENST00000553612 KLK12Q9UKR0 248 aa6.39□□□□□ -1.39
GTF2A1-203ENST00000553612 PLA2G2AP14555 144 aa6.38□□□□□ -1.39
GTF2A1-203ENST00000553612 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
GTF2A1-203ENST00000553612 LITAFQ99732 161 aa6.38□□□□□ -1.39
GTF2A1-203ENST00000553612 ZFAND2AQ8N6M9 145 aa6.37□□□□□ -1.39
GTF2A1-203ENST00000553612 LOC100131303A0A0U1RQF7 123 aa6.37□□□□□ -1.39
GTF2A1-203ENST00000553612 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms