RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 A0A1B0GUV1 79 aa13.52□□□□□ -0.24
SSH1-209ENST00000551165 HIST1H4GQ99525 98 aa13.52□□□□□ -0.24
SSH1-209ENST00000551165 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.25
SSH1-209ENST00000551165 DEFB131BA0A096LNP1 70 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 SMIM1B2RUZ4 78 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 H3BRM9 83 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 SEC11AP67812 179 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 CEND1Q8N111 149 aa13.51□□□□□ -0.25
SSH1-209ENST00000551165 LINC00959A0A1B0GUT2 108 aa13.5□□□□□ -0.25
SSH1-209ENST00000551165 TAX1BP3O14907 124 aa13.5□□□□□ -0.25
SSH1-209ENST00000551165 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
SSH1-209ENST00000551165 LELP1Q5T871 98 aa13.5□□□□□ -0.25
SSH1-209ENST00000551165 LINC00269Q8N2A0 174 aa13.49□□□□□ -0.25
SSH1-209ENST00000551165 TM2D2Q9BX73 214 aa13.49□□□□□ -0.25
SSH1-209ENST00000551165 IGLV5-39A0A0G2JS06 123 aa13.48□□□□□ -0.25
SSH1-209ENST00000551165 NDUFA12Q9UI09 145 aa13.48□□□□□ -0.25
SSH1-209ENST00000551165 DNAH9Q9NYC9 4486 aa13.48□□□□□ -0.25
SSH1-209ENST00000551165 SH2D6Q7Z4S9 175 aa13.47□□□□□ -0.25
SSH1-209ENST00000551165 H3BNG1 76 aa13.47□□□□□ -0.25
SSH1-209ENST00000551165 IGHV3OR16-9A0A0B4J2B5 98 aa13.46□□□□□ -0.25
SSH1-209ENST00000551165 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
SSH1-209ENST00000551165 K7ERJ3 54 aa13.46□□□□□ -0.25
SSH1-209ENST00000551165 ANGP03950 147 aaKnown RBP13.46□□□□□ -0.25
SSH1-209ENST00000551165 SRSF9Q13242 221 aaKnown RBP eCLIP13.46□□□□□ -0.25
SSH1-209ENST00000551165 TAL2Q16559 108 aa13.46□□□□□ -0.25
SSH1-209ENST00000551165 ZFAND6Q6FIF0 208 aa13.46□□□□□ -0.25
SSH1-209ENST00000551165 XCL1P47992 114 aa13.45□□□□□ -0.26
SSH1-209ENST00000551165 PTTG1IPP53801 180 aa13.45□□□□□ -0.26
SSH1-209ENST00000551165 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
SSH1-209ENST00000551165 CCL25O15444 150 aa13.45□□□□□ -0.26
SSH1-209ENST00000551165 ESRGQ1W209 222 aa13.44□□□□□ -0.26
SSH1-209ENST00000551165 IGLV10-54A0A075B6I4 117 aa13.44□□□□□ -0.26
SSH1-209ENST00000551165 RAB37Q96AX2 223 aa13.44□□□□□ -0.26
SSH1-209ENST00000551165 NHP2Q9NX24 153 aaKnown RBP13.44□□□□□ -0.26
SSH1-209ENST00000551165 COX11Q9Y6N1 276 aa13.44□□□□□ -0.26
SSH1-209ENST00000551165 WFDC10BQ8IUB3 73 aa13.43□□□□□ -0.26
SSH1-209ENST00000551165 STAB2Q8WWQ8 2551 aa13.43□□□□□ -0.26
SSH1-209ENST00000551165 A6NDN8 102 aa13.43□□□□□ -0.26
SSH1-209ENST00000551165 LITAFQ99732 161 aa13.43□□□□□ -0.26
SSH1-209ENST00000551165 NAA38Q9BRA0 125 aaKnown RBP13.43□□□□□ -0.26
SSH1-209ENST00000551165 REG3AQ06141 175 aa13.42□□□□□ -0.26
SSH1-209ENST00000551165 ADAMTSL4-AS1Q5T5F5 129 aa13.42□□□□□ -0.26
SSH1-209ENST00000551165 ZNF625Q96I27 306 aaPredicted RBP13.42□□□□□ -0.26
SSH1-209ENST00000551165 IGHV3-30P01768 117 aa13.42□□□□□ -0.26
SSH1-209ENST00000551165 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
SSH1-209ENST00000551165 IGHV3-30-5P0DP03 117 aa13.42□□□□□ -0.26
SSH1-209ENST00000551165 Q9H8V8 135 aa13.41□□□□□ -0.26
SSH1-209ENST00000551165 SPANXB1Q9NS25 103 aaPredicted RBP13.41□□□□□ -0.26
SSH1-209ENST00000551165 SS18Q15532 418 aa13.4□□□□□ -0.26
SSH1-209ENST00000551165 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
SSH1-209ENST00000551165 A0A087WZ39 114 aa13.39□□□□□ -0.27
SSH1-209ENST00000551165 NDUFA1O15239 70 aa13.39□□□□□ -0.27
SSH1-209ENST00000551165 TOMM7Q9P0U1 55 aa13.39□□□□□ -0.27
SSH1-209ENST00000551165 TRAV10A0A0B4J240 114 aa13.38□□□□□ -0.27
SSH1-209ENST00000551165 CHCHD10Q8WYQ3 142 aaPredicted RBP13.38□□□□□ -0.27
SSH1-209ENST00000551165 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
SSH1-209ENST00000551165 DAND5Q8N907 189 aa13.37□□□□□ -0.27
SSH1-209ENST00000551165 ENHOQ6UWT2 76 aa13.37□□□□□ -0.27
SSH1-209ENST00000551165 A0A0U1RRA0 63 aa13.36□□□□□ -0.27
SSH1-209ENST00000551165 MUSTN1Q8IVN3 82 aa13.36□□□□□ -0.27
SSH1-209ENST00000551165 EIF4EBP3O60516 100 aaPredicted RBP13.36□□□□□ -0.27
SSH1-209ENST00000551165 NPC2P61916 151 aa13.36□□□□□ -0.27
SSH1-209ENST00000551165 COX7B2Q8TF08 81 aa13.36□□□□□ -0.27
SSH1-209ENST00000551165 B9D2Q9BPU9 175 aa13.36□□□□□ -0.27
SSH1-209ENST00000551165 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
SSH1-209ENST00000551165 C21orf62-AS1Q17RA5 79 aa13.35□□□□□ -0.27
SSH1-209ENST00000551165 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
SSH1-209ENST00000551165 H3BUT2 72 aa13.34□□□□□ -0.27
SSH1-209ENST00000551165 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.27
SSH1-209ENST00000551165 C9orf118A6NHY6 69 aa13.33□□□□□ -0.28
SSH1-209ENST00000551165 PRSS2P07478 247 aa13.33□□□□□ -0.28
SSH1-209ENST00000551165 CD164L2Q6UWJ8 174 aa13.33□□□□□ -0.28
SSH1-209ENST00000551165 PRKDCP78527 4128 aaKnown RBP13.33□□□□□ -0.28
SSH1-209ENST00000551165 A0A1B0GWB2 263 aa13.32□□□□□ -0.28
SSH1-209ENST00000551165 IGLL5B9A064 214 aa13.32□□□□□ -0.28
SSH1-209ENST00000551165 APOMO95445 188 aa13.32□□□□□ -0.28
SSH1-209ENST00000551165 FOXI1Q12951 378 aa13.32□□□□□ -0.28
SSH1-209ENST00000551165 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
SSH1-209ENST00000551165 A4D1N5 150 aa13.31□□□□□ -0.28
SSH1-209ENST00000551165 GAGE12HA6NDE8 117 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 CFC1BP0CG36 223 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 CFC1P0CG37 223 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 MIAQ16674 131 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 SPANXDQ9BXN6 97 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 SPANXCQ9NY87 97 aa13.3□□□□□ -0.28
SSH1-209ENST00000551165 COX7A2LO14548 114 aa13.29□□□□□ -0.28
SSH1-209ENST00000551165 VAMP3Q15836 100 aa13.29□□□□□ -0.28
SSH1-209ENST00000551165 MEIG1Q5JSS6 88 aa13.28□□□□□ -0.28
SSH1-209ENST00000551165 LINC00588Q9Y4M8 146 aa13.28□□□□□ -0.28
SSH1-209ENST00000551165 A6NJY4 79 aa13.28□□□□□ -0.28
SSH1-209ENST00000551165 TIMM17BO60830 172 aa13.28□□□□□ -0.28
SSH1-209ENST00000551165 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
SSH1-209ENST00000551165 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.29
SSH1-209ENST00000551165 LYSTQ99698 3801 aa13.26□□□□□ -0.29
SSH1-209ENST00000551165 C6orf226Q5I0X4 101 aa13.26□□□□□ -0.29
SSH1-209ENST00000551165 CRPP02741 224 aa13.25□□□□□ -0.29
SSH1-209ENST00000551165 KIAA0087Q14695 138 aa13.25□□□□□ -0.29
SSH1-209ENST00000551165 CSMD3Q7Z407 3707 aa13.25□□□□□ -0.29
SSH1-209ENST00000551165 MALP21145 153 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms