RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 USMG5Q96IX5 58 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 RHPN1-AS1Q9BWJ2 59 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 MAP1AP78559 2803 aaPredicted RBP5.71□□□□□ -1.5
UBR1-202ENST00000546274 IGHV4OR15-8A0A075B7B6 117 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 A0A087WW49 117 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 F8WEM9 126 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 NCR3O14931 201 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 DOPEY1Q5JWR5 2465 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
UBR1-202ENST00000546274 H3BUX3 64 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 CD28P10747 220 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 IGHV1-58A0A0C4DH39 117 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 CCKP06307 115 aa5.7□□□□□ -1.5
UBR1-202ENST00000546274 IGLV4-3A0A075B6K6 122 aa5.69□□□□□ -1.5
UBR1-202ENST00000546274 SNRPD3P62318 126 aaKnown RBP5.69□□□□□ -1.5
UBR1-202ENST00000546274 SPTAN1Q13813 2472 aaKnown RBP5.69□□□□□ -1.5
UBR1-202ENST00000546274 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
UBR1-202ENST00000546274 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
UBR1-202ENST00000546274 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
UBR1-202ENST00000546274 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
UBR1-202ENST00000546274 UTP20O75691 2785 aaKnown RBP5.68□□□□□ -1.5
UBR1-202ENST00000546274 Q96MF0 132 aa5.68□□□□□ -1.5
UBR1-202ENST00000546274 SLPIP03973 132 aa5.67□□□□□ -1.5
UBR1-202ENST00000546274 K7EMT4 169 aa5.67□□□□□ -1.5
UBR1-202ENST00000546274 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
UBR1-202ENST00000546274 FLNCQ14315 2725 aa5.67□□□□□ -1.5
UBR1-202ENST00000546274 USP9XQ93008 2570 aaPredicted RBP5.67□□□□□ -1.5
UBR1-202ENST00000546274 IGHV3-16A0A0C4DH30 117 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 IGHV4-30-2A0A087WSY4 118 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 A0A087WYN8 130 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 C10orf99Q6UWK7 81 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 Q9H8V8 135 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 PIK3CD-AS1Q5SR53 167 aa5.66□□□□□ -1.5
UBR1-202ENST00000546274 M0QY20 66 aa5.65□□□□□ -1.5
UBR1-202ENST00000546274 LRRK2Q5S007 2527 aa5.65□□□□□ -1.5
UBR1-202ENST00000546274 A0A087WZ39 114 aa5.65□□□□□ -1.51
UBR1-202ENST00000546274 PTPN13Q12923 2485 aa5.65□□□□□ -1.51
UBR1-202ENST00000546274 USP9YO00507 2555 aaPredicted RBP5.64□□□□□ -1.51
UBR1-202ENST00000546274 TMEM89A2RUT3 159 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 MSMBP08118 114 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 CCL19Q99731 98 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 MRPS36P82909 103 aaKnown RBP5.64□□□□□ -1.51
UBR1-202ENST00000546274 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 LECT2O14960 151 aa5.64□□□□□ -1.51
UBR1-202ENST00000546274 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
UBR1-202ENST00000546274 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 K7EQG2 157 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 PAX4O43316 350 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 HIST2H2BCQ6DN03 193 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 HIST2H2BDQ6DRA6 164 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 MIR7-3HGQ8N6C7 128 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 ZANQ9Y493 2812 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 TRAV7A0A075B6U4 112 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
UBR1-202ENST00000546274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.62□□□□□ -1.513e-8■■■■■ 31
UBR1-202ENST00000546274 IGHV4-59P01825 116 aa5.62□□□□□ -1.51
UBR1-202ENST00000546274 SPINK13Q1W4C9 94 aa5.62□□□□□ -1.51
UBR1-202ENST00000546274 AKAP9Q99996 3911 aa5.62□□□□□ -1.51
UBR1-202ENST00000546274 TRAV10A0A0B4J240 114 aa5.62□□□□□ -1.51
UBR1-202ENST00000546274 FBN2P35556 2912 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 IGHV1OR15-1A0A075B7D0 117 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 LRCOL1A6NCL2 159 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 CRPP02741 224 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 NDUFA1O15239 70 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
UBR1-202ENST00000546274 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
UBR1-202ENST00000546274 RPL36AP83881 106 aaKnown RBP5.61□□□□□ -1.51
UBR1-202ENST00000546274 DEFB112Q30KQ8 113 aa5.61□□□□□ -1.51
UBR1-202ENST00000546274 RPL36ALQ969Q0 106 aaKnown RBP5.61□□□□□ -1.51
UBR1-202ENST00000546274 HAMPP81172 84 aa5.6□□□□□ -1.51
UBR1-202ENST00000546274 C2CD3Q4AC94 2353 aa5.6□□□□□ -1.51
UBR1-202ENST00000546274 B4DSR2 109 aa5.6□□□□□ -1.51
UBR1-202ENST00000546274 UBL5Q9BZL1 73 aa5.6□□□□□ -1.51
UBR1-202ENST00000546274 Q6ZTI0 123 aa5.59□□□□□ -1.51
UBR1-202ENST00000546274 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.51
UBR1-202ENST00000546274 PROK1P58294 105 aa5.59□□□□□ -1.51
UBR1-202ENST00000546274 DAD1P61803 113 aa5.59□□□□□ -1.51
UBR1-202ENST00000546274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
UBR1-202ENST00000546274 Q9UF83 564 aa5.59□□□□□ -1.51
UBR1-202ENST00000546274 A0A096LNT2 108 aa5.59□□□□□ -1.52
UBR1-202ENST00000546274 CD164Q04900 197 aa5.59□□□□□ -1.52
UBR1-202ENST00000546274 LINC00337Q8N6G1 96 aa5.59□□□□□ -1.52
UBR1-202ENST00000546274 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.52
UBR1-202ENST00000546274 HECTD1Q9ULT8 2610 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
UBR1-202ENST00000546274 TRAV13-2A0A0B4J235 113 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 PRM2P04554 102 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 HTN1P15515 57 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 CSPG4Q6UVK1 2322 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 MIFP14174 115 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms