RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
CPSF7-223ENST00000544669 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
CPSF7-223ENST00000544669 H0YGX0 51 aa9.2□□□□□ -0.94
CPSF7-223ENST00000544669 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
CPSF7-223ENST00000544669 CITED1Q99966 193 aa9.2□□□□□ -0.94
CPSF7-223ENST00000544669 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
CPSF7-223ENST00000544669 SS18Q15532 418 aa9.19□□□□□ -0.94
CPSF7-223ENST00000544669 MYO18BQ8IUG5 2567 aa9.19□□□□□ -0.94
CPSF7-223ENST00000544669 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
CPSF7-223ENST00000544669 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
CPSF7-223ENST00000544669 GAGE6Q13070 117 aa9.19□□□□□ -0.94
CPSF7-223ENST00000544669 TTC32Q5I0X7 151 aa9.18□□□□□ -0.94
CPSF7-223ENST00000544669 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 FLNCQ14315 2725 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-223ENST00000544669 CELSR1Q9NYQ6 3014 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 J3QKU1 62 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 LINC00158P58513 81 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 SOSTDC1Q6X4U4 206 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 ANAPC13Q9BS18 74 aa9.17□□□□□ -0.94
CPSF7-223ENST00000544669 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
CPSF7-223ENST00000544669 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
CPSF7-223ENST00000544669 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
CPSF7-223ENST00000544669 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
CPSF7-223ENST00000544669 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
CPSF7-223ENST00000544669 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
CPSF7-223ENST00000544669 C9orf66Q5T8R8 295 aa9.15□□□□□ -0.94
CPSF7-223ENST00000544669 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
CPSF7-223ENST00000544669 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
CPSF7-223ENST00000544669 LOC100131303A0A0U1RQF7 123 aa9.15□□□□□ -0.95
CPSF7-223ENST00000544669 CXCL5P42830 114 aa9.15□□□□□ -0.95
CPSF7-223ENST00000544669 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.95
CPSF7-223ENST00000544669 LINC00482Q8N8I6 264 aa9.15□□□□□ -0.95
CPSF7-223ENST00000544669 DNAL4O96015 105 aa9.14□□□□□ -0.95
CPSF7-223ENST00000544669 BAALC-AS2P0C853 105 aa9.14□□□□□ -0.95
CPSF7-223ENST00000544669 Q8IZM0 81 aa9.14□□□□□ -0.95
CPSF7-223ENST00000544669 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
CPSF7-223ENST00000544669 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
CPSF7-223ENST00000544669 GYPEP15421 78 aa9.13□□□□□ -0.95
CPSF7-223ENST00000544669 APOC4P55056 127 aa9.13□□□□□ -0.95
CPSF7-223ENST00000544669 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
CPSF7-223ENST00000544669 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
CPSF7-223ENST00000544669 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
CPSF7-223ENST00000544669 COX17Q14061 63 aa9.12□□□□□ -0.95
CPSF7-223ENST00000544669 CRLF1O75462 422 aa9.12□□□□□ -0.95
CPSF7-223ENST00000544669 PTPN13Q12923 2485 aa9.12□□□□□ -0.95
CPSF7-223ENST00000544669 FBN2P35556 2912 aa9.11□□□□□ -0.95
CPSF7-223ENST00000544669 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
CPSF7-223ENST00000544669 A0A1B0GX51 115 aa9.11□□□□□ -0.95
CPSF7-223ENST00000544669 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
CPSF7-223ENST00000544669 UTP20O75691 2785 aaKnown RBP9.1□□□□□ -0.95
CPSF7-223ENST00000544669 PAX4O43316 350 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 PLA2G2AP14555 144 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 MALP21145 153 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 CCL18P55774 89 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 LINC00643Q86TS7 51 aa9.1□□□□□ -0.95
CPSF7-223ENST00000544669 VPS13CQ709C8 3753 aa9.09□□□□□ -0.95
CPSF7-223ENST00000544669 X6R8D5 127 aa9.09□□□□□ -0.95
CPSF7-223ENST00000544669 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 NDUFC2O95298 119 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 CELSR2Q9HCU4 2923 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
CPSF7-223ENST00000544669 USP24Q9UPU5 2620 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 IGKV2-28A0A075B6P5 120 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 IGKV2D-28P01615 120 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 ATP5G1P05496 136 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 SMIM11BQ8TCY0 68 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 POLQO75417 2590 aa9.07□□□□□ -0.96
CPSF7-223ENST00000544669 LY6G6DO95868 133 aa9.06□□□□□ -0.96
CPSF7-223ENST00000544669 MIFP14174 115 aa9.06□□□□□ -0.96
CPSF7-223ENST00000544669 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
CPSF7-223ENST00000544669 PFN2P35080 140 aa9.05□□□□□ -0.96
CPSF7-223ENST00000544669 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
CPSF7-223ENST00000544669 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
CPSF7-223ENST00000544669 XCL1P47992 114 aa9.05□□□□□ -0.96
CPSF7-223ENST00000544669 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
CPSF7-223ENST00000544669 TEX15Q9BXT5 2789 aa9.04□□□□□ -0.96
CPSF7-223ENST00000544669 DAD1P61803 113 aa9.04□□□□□ -0.96
CPSF7-223ENST00000544669 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
CPSF7-223ENST00000544669 TMEM126AQ9H061 195 aa9.03□□□□□ -0.96
CPSF7-223ENST00000544669 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
CPSF7-223ENST00000544669 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
CPSF7-223ENST00000544669 H3BQ85 93 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 ORMDL1Q9P0S3 153 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 ZANQ9Y493 2812 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 REG3AQ06141 175 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
CPSF7-223ENST00000544669 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
CPSF7-223ENST00000544669 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
CPSF7-223ENST00000544669 LELP1Q5T871 98 aa9□□□□□ -0.97
CPSF7-223ENST00000544669 LINC00269Q8N2A0 174 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms