RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 REG3AQ06141 175 aa14.18□□□□□ -0.14
SUDS3-204ENST00000543473 MPLKIPQ8TAP9 179 aa14.18□□□□□ -0.14
SUDS3-204ENST00000543473 CHCHD10Q8WYQ3 142 aaPredicted RBP14.18□□□□□ -0.14
SUDS3-204ENST00000543473 A0A1W2PPR1 153 aa14.17□□□□□ -0.14
SUDS3-204ENST00000543473 TET2Q6N021 2002 aaPredicted RBP14.17□□□□□ -0.14
SUDS3-204ENST00000543473 M0QXV9 152 aa14.17□□□□□ -0.14
SUDS3-204ENST00000543473 ZNF580Q9UK33 172 aa14.16□□□□□ -0.14
SUDS3-204ENST00000543473 ADAMTSL4-AS1Q5T5F5 129 aa14.16□□□□□ -0.14
SUDS3-204ENST00000543473 TRBV6-4A0A1B0GX49 114 aa14.16□□□□□ -0.14
SUDS3-204ENST00000543473 MRGPRG-AS1Q2M3A8 158 aa14.16□□□□□ -0.14
SUDS3-204ENST00000543473 Q6JHZ5 121 aa14.15□□□□□ -0.14
SUDS3-204ENST00000543473 C5orf42Q9H799 3197 aa14.15□□□□□ -0.14
SUDS3-204ENST00000543473 NDUFS5O43920 106 aa14.15□□□□□ -0.14
SUDS3-204ENST00000543473 PKD1L2Q7Z442 2459 aa14.15□□□□□ -0.14
SUDS3-204ENST00000543473 LINC00526Q96FQ7 95 aa14.15□□□□□ -0.14
SUDS3-204ENST00000543473 FN1P02751 2386 aaKnown RBP14.14□□□□□ -0.15
SUDS3-204ENST00000543473 LINC00242Q5T6M2 205 aa14.14□□□□□ -0.15
SUDS3-204ENST00000543473 EXPH5Q8NEV8 1989 aa14.14□□□□□ -0.15
SUDS3-204ENST00000543473 INAFM1C9JVW0 142 aa14.14□□□□□ -0.15
SUDS3-204ENST00000543473 NDUFC2-KCTD14E9PQ53 114 aa14.13□□□□□ -0.15
SUDS3-204ENST00000543473 IGLV1-40P01703 118 aa14.13□□□□□ -0.15
SUDS3-204ENST00000543473 POLQO75417 2590 aa14.12□□□□□ -0.15
SUDS3-204ENST00000543473 PKIGQ9Y2B9 76 aa14.12□□□□□ -0.15
SUDS3-204ENST00000543473 SNURFQ9Y675 71 aa14.12□□□□□ -0.15
SUDS3-204ENST00000543473 CCL18P55774 89 aa14.11□□□□□ -0.15
SUDS3-204ENST00000543473 MTORP42345 2549 aa14.11□□□□□ -0.15
SUDS3-204ENST00000543473 KRTAP10-9P60411 292 aa14.11□□□□□ -0.15
SUDS3-204ENST00000543473 CDC42SE2Q9NRR3 84 aa14.1□□□□□ -0.15
SUDS3-204ENST00000543473 SMCPP49901 116 aaPredicted RBP14.1□□□□□ -0.15
SUDS3-204ENST00000543473 Q6ZQY7 126 aa14.1□□□□□ -0.15
SUDS3-204ENST00000543473 XAGE1AQ9HD64 81 aa14.1□□□□□ -0.15
SUDS3-204ENST00000543473 A0A0U1RQV1 116 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 AMELXQ99217 191 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 PRO0461Q9UI25 63 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 A0A087WVE0 104 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 SMIM1B2RUZ4 78 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 AVPP01185 164 aa14.09□□□□□ -0.15
SUDS3-204ENST00000543473 MKI67P46013 3256 aaKnown RBP14.08□□□□□ -0.15
SUDS3-204ENST00000543473 PLA2G2AP14555 144 aa14.08□□□□□ -0.16
SUDS3-204ENST00000543473 LINC01546A6NGU7 62 aa14.08□□□□□ -0.16
SUDS3-204ENST00000543473 NDUFB1O75438 58 aa14.08□□□□□ -0.16
SUDS3-204ENST00000543473 EDN2P20800 178 aa14.08□□□□□ -0.16
SUDS3-204ENST00000543473 NDUFC1O43677 76 aa14.08□□□□□ -0.16
SUDS3-204ENST00000543473 RPL28P46779 137 aaKnown RBP14.07□□□□□ -0.16
SUDS3-204ENST00000543473 LOC100131303A0A0U1RQF7 123 aa14.06□□□□□ -0.16
SUDS3-204ENST00000543473 SMIM9A6NGZ8 99 aa14.06□□□□□ -0.16
SUDS3-204ENST00000543473 CHD9Q3L8U1 2897 aa14.06□□□□□ -0.16
SUDS3-204ENST00000543473 CHCHD7Q9BUK0 85 aa14.06□□□□□ -0.16
SUDS3-204ENST00000543473 CCKP06307 115 aa14.06□□□□□ -0.16
SUDS3-204ENST00000543473 LINC00959A0A1B0GUT2 108 aa14.05□□□□□ -0.16
SUDS3-204ENST00000543473 HRCT1Q6UXD1 115 aa14.04□□□□□ -0.16
SUDS3-204ENST00000543473 COX6A2Q02221 97 aa14.03□□□□□ -0.16
SUDS3-204ENST00000543473 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
SUDS3-204ENST00000543473 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
SUDS3-204ENST00000543473 LY6G6DO95868 133 aa14.03□□□□□ -0.16
SUDS3-204ENST00000543473 ATP5EP56381 51 aaPredicted RBP14.02□□□□□ -0.16
SUDS3-204ENST00000543473 ADAMTS20P59510 1910 aa14.02□□□□□ -0.16
SUDS3-204ENST00000543473 CD164L2Q6UWJ8 174 aa14.02□□□□□ -0.17
SUDS3-204ENST00000543473 LAMA3Q16787 3333 aa14.01□□□□□ -0.17
SUDS3-204ENST00000543473 FAM19A5Q7Z5A7 132 aaPredicted RBP14.01□□□□□ -0.17
SUDS3-204ENST00000543473 LYRM9A8MSI8 78 aa14□□□□□ -0.17
SUDS3-204ENST00000543473 FAM19A3Q7Z5A8 133 aa14□□□□□ -0.17
SUDS3-204ENST00000543473 KIF25-AS1Q9Y6Z4 181 aa13.99□□□□□ -0.17
SUDS3-204ENST00000543473 A0A087WYN8 130 aa13.99□□□□□ -0.17
SUDS3-204ENST00000543473 C18orf65Q6ZTR6 163 aa13.99□□□□□ -0.17
SUDS3-204ENST00000543473 BBC3Q96PG8 261 aaPredicted RBP13.99□□□□□ -0.17
SUDS3-204ENST00000543473 SVIPQ8NHG7 77 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 LINC01006Q8NI28 216 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 TRBV7-7A0A0K0K1E9 115 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 C3orf84H3BNL1 204 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 NTM-AS1Q6ZSK4 140 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 DOPEY1Q5JWR5 2465 aa13.98□□□□□ -0.17
SUDS3-204ENST00000543473 C1orf158Q8N1D5 194 aa13.97□□□□□ -0.17
SUDS3-204ENST00000543473 SMIM26A0A096LP01 95 aa13.97□□□□□ -0.17
SUDS3-204ENST00000543473 Q8IZM0 81 aa13.97□□□□□ -0.17
SUDS3-204ENST00000543473 TRAV7A0A075B6U4 112 aa13.96□□□□□ -0.18
SUDS3-204ENST00000543473 LOC107984640A0A0U1RRK4 108 aa13.96□□□□□ -0.18
SUDS3-204ENST00000543473 SPTSSBQ8NFR3 76 aa13.95□□□□□ -0.18
SUDS3-204ENST00000543473 BRCA2P51587 3418 aa13.94□□□□□ -0.18
SUDS3-204ENST00000543473 ACANP16112 2415 aa13.94□□□□□ -0.18
SUDS3-204ENST00000543473 RAI1Q7Z5J4 1906 aaPredicted RBP13.94□□□□□ -0.18
SUDS3-204ENST00000543473 H0Y9J4 135 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 COX17Q14061 63 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 Q8N814 137 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 WFDC10AQ9H1F0 79 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 PPDPFQ9H3Y8 114 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 V9GYY9 64 aa13.93□□□□□ -0.18
SUDS3-204ENST00000543473 CSDC2Q9Y534 153 aaKnown RBP13.93□□□□□ -0.18
SUDS3-204ENST00000543473 UBE2AP49459 152 aa13.92□□□□□ -0.18
SUDS3-204ENST00000543473 HILS1P60008 231 aa13.92□□□□□ -0.18
SUDS3-204ENST00000543473 SMR3AQ99954 134 aa13.92□□□□□ -0.18
SUDS3-204ENST00000543473 CHKB-CPT1BH3BT56 60 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 MIFP14174 115 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 LINC00846Q9NV44 126 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 SERP1Q9Y6X1 66 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 HIGD2AQ9BW72 106 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 A0A087WZ39 114 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 Q6ZSN1 163 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 SHISA2Q6UWI4 295 aa13.91□□□□□ -0.18
SUDS3-204ENST00000543473 LINC00315P59091 139 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms