RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
SNHG1-211ENST00000539921 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
SNHG1-211ENST00000539921 SDK2Q58EX2 2172 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 MUC4Q99102 2169 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 PLXNB1O43157 2135 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 K7EMT4 169 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 COX7B2Q8TF08 81 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 BDP1A6H8Y1 2624 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 TTC28Q96AY4 2481 aa4.27□□□□□ -1.73
SNHG1-211ENST00000539921 ASXL3Q9C0F0 2248 aa4.26□□□□□ -1.73
SNHG1-211ENST00000539921 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-211ENST00000539921 H3BPC8 53 aa4.26□□□□□ -1.73
SNHG1-211ENST00000539921 LMO4P61968 165 aa4.26□□□□□ -1.73
SNHG1-211ENST00000539921 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
SNHG1-211ENST00000539921 CADP27708 2225 aa4.26□□□□□ -1.73
SNHG1-211ENST00000539921 ABCA1O95477 2261 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 IGHV4-30-2A0A087WSY4 118 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 A8MUN3 132 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 PRB4P10163 310 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-211ENST00000539921 GYPEP15421 78 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 COX7BP24311 80 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 COX17Q14061 63 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 CNEP1R1Q8N9A8 125 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
SNHG1-211ENST00000539921 A8MTW9 85 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 CCL24O00175 119 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 COX6A2Q02221 97 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-211ENST00000539921 Q6ZTI0 123 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 USMG5Q96IX5 58 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 S4R3C0 116 aa4.24□□□□□ -1.73
SNHG1-211ENST00000539921 NCOR1O75376 2440 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 A0A096LNT2 108 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 C19orf84I3L1E1 186 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 PSPHP1O15172 72 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 SLPIP03973 132 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 PLA2G2AP14555 144 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 LINC00158P58513 81 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 NANOS2P60321 138 aaKnown RBP4.23□□□□□ -1.73
SNHG1-211ENST00000539921 LYPD2Q6UXB3 125 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-211ENST00000539921 ARHGAP32A7KAX9 2087 aa4.23□□□□□ -1.73
SNHG1-211ENST00000539921 IGHV3-49A0A0A0MS15 119 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 IGHV3-23P01764 117 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 Q8N9W7 124 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 CELA1Q9UNI1 258 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 KNL1Q8NG31 2342 aa4.22□□□□□ -1.73
SNHG1-211ENST00000539921 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
SNHG1-211ENST00000539921 COX7A1P24310 79 aa4.21□□□□□ -1.74
SNHG1-211ENST00000539921 IGFL3Q6UXB1 125 aa4.21□□□□□ -1.74
SNHG1-211ENST00000539921 LINC01356Q8N9X3 169 aa4.21□□□□□ -1.74
SNHG1-211ENST00000539921 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
SNHG1-211ENST00000539921 TRGV2A0A075B6R0 118 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3-66A0A0C4DH42 116 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 C3orf84H3BNL1 204 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
SNHG1-211ENST00000539921 SERTAD4-AS1Q5TG53 156 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 Q8IZM0 81 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 ZNF843Q8N446 348 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 B9D2Q9BPU9 175 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 KCNQ1DNQ9H478 68 aa4.2□□□□□ -1.74
SNHG1-211ENST00000539921 DNAJC13O75165 2243 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3OR16-9A0A0B4J2B5 98 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 ATP6V0E1O15342 81 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 LINC01565O15544 149 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 C9orf116Q5BN46 136 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-211ENST00000539921 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 PLCE1Q9P212 2302 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 C5orf42Q9H799 3197 aa4.19□□□□□ -1.74
SNHG1-211ENST00000539921 CACNA1EQ15878 2313 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3OR16-8A0A075B7F1 116 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV4-28A0A0C4DH34 117 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV4-59P01825 116 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 PRM2P04554 102 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV4-30-4P0DP06 118 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV4-61A0A0C4DH41 118 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 A6NED7 52 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 BSPH1Q075Z2 132 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 CASC2Q6XLA1 102 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 SPTSSBQ8NFR3 76 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 PLAC8Q9NZF1 115 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 MED13Q9UHV7 2174 aa4.17□□□□□ -1.74
SNHG1-211ENST00000539921 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3OR16-13A0A075B7E8 117 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3-74A0A0B4J1X5 117 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 PLA2G1BP04054 148 aaKnown RBP4.16□□□□□ -1.74
SNHG1-211ENST00000539921 MP68P56378 58 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 DEFB119Q8N690 84 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms