RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
SNHG1-201ENST00000535076 KPRPQ5T749 579 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-201ENST00000535076 C9orf47Q6ZRZ4 202 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 COX7B2Q8TF08 81 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
SNHG1-201ENST00000535076 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 DEFB126Q9BYW3 111 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 PRR14LQ5THK1 2151 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-38A0A0C4DH36 116 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 ETDCA0A1B0GVM5 59 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV4-38-2P0DP08 117 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV1-2P23083 117 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 LINC00315P59091 139 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 RPL39P5Q59GN2 51 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 CNEP1R1Q8N9A8 125 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 FDCSPQ8NFU4 85 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 KCNQ1DNQ9H478 68 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 DIDO1Q9BTC0 2240 aaKnown RBP3.45□□□□□ -1.86
SNHG1-201ENST00000535076 DOCK10Q96BY6 2186 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 ZFHX3Q15911 3703 aa3.45□□□□□ -1.86
SNHG1-201ENST00000535076 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 A0A087WSZ3 146 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-43A0A0B4J1X8 118 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 IGLV9-49A0A0B4J1Y8 123 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-201ENST00000535076 K7EQD1 137 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV1-17P01599 117 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 MSMBP08118 114 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 RNASE13Q5GAN3 156 aaKnown RBP3.44□□□□□ -1.86
SNHG1-201ENST00000535076 Q6ZTI0 123 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 Q8NDZ9 215 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 PDE4DIPQ5VU43 2346 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 CEP350Q5VT06 3117 aa3.44□□□□□ -1.86
SNHG1-201ENST00000535076 DNAJC13O75165 2243 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 TNCP24821 2201 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV2-28A0A075B6P5 120 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-64A0A075B6Q5 118 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV2-40A0A087WW87 121 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV1-3A0A0C4DH29 117 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 A0A1W2PNM2 257 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 NDUFA4O00483 81 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV2D-40P01614 121 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV2D-28P01615 120 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV3-15P01624 115 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV4-59P01825 116 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 PRB4P10163 310 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-201ENST00000535076 KRTAP10-9P60411 292 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 REG3AQ06141 175 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 Q8NAQ8 132 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 NPBQ8NG41 125 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 WFDC10AQ9H1F0 79 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 ZNF407Q9C0G0 2248 aa3.43□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-15A0A0B4J1V0 119 aa3.42□□□□□ -1.86
SNHG1-201ENST00000535076 IGHV3-20A0A0C4DH32 117 aa3.42□□□□□ -1.86
SNHG1-201ENST00000535076 SRRM5B3KS81 715 aa3.42□□□□□ -1.86
SNHG1-201ENST00000535076 I3L2K1 104 aa3.42□□□□□ -1.86
SNHG1-201ENST00000535076 CXCL17Q6UXB2 119 aa3.42□□□□□ -1.86
SNHG1-201ENST00000535076 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-201ENST00000535076 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 CLPSL1A2RUU4 121 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 DEFB108AA8MXU0 73 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 SPAG11BQ08648 103 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 ZNF580Q9UK33 172 aa3.41□□□□□ -1.86
SNHG1-201ENST00000535076 IGLV4-60A0A075B6I1 120 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 H0Y9P7 68 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-11P01762 117 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-23P01764 117 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 MGPP08493 103 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 COX7BP24311 80 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 MALRD1Q5VYJ5 2156 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 Q8TAT8 98 aa3.4□□□□□ -1.87
SNHG1-201ENST00000535076 KIAA0100Q14667 2235 aaKnown RBP3.4□□□□□ -1.87
SNHG1-201ENST00000535076 PCNTO95613 3336 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV3-21A0A0B4J1V1 117 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 M0QY20 66 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 IGLV2-23P01705 113 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 IGKV2-30P06310 120 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 CCL14Q16627 93 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 GAFA1Q96PS6 74 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 RNF5Q99942 180 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 TTTY12Q9BZ98 90 aa3.39□□□□□ -1.87
SNHG1-201ENST00000535076 SDK2Q58EX2 2172 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 CADP27708 2225 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 IGLV1-44P01699 117 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 TFF1P04155 84 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 CHTF8P0CG12 524 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 C17orf58Q2M2W7 97 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
SNHG1-201ENST00000535076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-201ENST00000535076 LINC00575Q6W349 94 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms