RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ENHOQ6UWT2 76 aa8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 LINC00474Q9P2X8 69 aa8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 NDUFC1O43677 76 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 Q6Q795 121 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 CEMP1Q6PRD7 247 aaPredicted RBP8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 SORL1Q92673 2214 aa8.22□□□□□ -1.09
AMBRA1-211ENST00000533727 UTRNP46939 3433 aa8.21□□□□□ -1.09
AMBRA1-211ENST00000533727 TRBV27A0A0K0K1C4 114 aa8.21□□□□□ -1.1
AMBRA1-211ENST00000533727 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
AMBRA1-211ENST00000533727 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
AMBRA1-211ENST00000533727 MUC7Q8TAX7 377 aa8.21□□□□□ -1.1
AMBRA1-211ENST00000533727 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 RNASE3P12724 160 aaKnown RBP8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 DOPEY1Q5JWR5 2465 aa8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
AMBRA1-211ENST00000533727 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 LINC00694P0DN24 101 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 COX7BP24311 80 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 LINC00310P59036 64 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 LRRK2Q5S007 2527 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 IGLV4-69A0A075B6H9 119 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
AMBRA1-211ENST00000533727 LST1O00453 97 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 CRIP1P50238 77 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 ARHGAP32A7KAX9 2087 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 UBE2D3P61077 147 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 UBE2D2P62837 147 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 RNF185Q96GF1 192 aa8.18□□□□□ -1.1
AMBRA1-211ENST00000533727 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 TIMM17BO60830 172 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 A0A087WZ39 114 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 M0R2N4 97 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 FSHBP01225 129 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 SMIM26A0A096LP01 95 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 HRCT1Q6UXD1 115 aa8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
AMBRA1-211ENST00000533727 BEAN1Q3B7T3 259 aa8.16□□□□□ -1.1
AMBRA1-211ENST00000533727 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.16□□□□□ -1.1
AMBRA1-211ENST00000533727 SLPIP03973 132 aa8.16□□□□□ -1.1
AMBRA1-211ENST00000533727 PRR9Q5T870 116 aa8.16□□□□□ -1.1
AMBRA1-211ENST00000533727 RETNQ9HD89 108 aa8.16□□□□□ -1.1
AMBRA1-211ENST00000533727 SCXQ7RTU7 201 aa8.15□□□□□ -1.1
AMBRA1-211ENST00000533727 EPG5Q9HCE0 2579 aa8.15□□□□□ -1.1
AMBRA1-211ENST00000533727 FHL3Q13643 280 aa8.15□□□□□ -1.1
AMBRA1-211ENST00000533727 C1orf158Q8N1D5 194 aa8.14□□□□□ -1.11
AMBRA1-211ENST00000533727 F8WDY8 70 aa8.14□□□□□ -1.11
AMBRA1-211ENST00000533727 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
AMBRA1-211ENST00000533727 SNURFQ9Y675 71 aa8.14□□□□□ -1.11
AMBRA1-211ENST00000533727 Q6ZTC4 211 aa8.14□□□□□ -1.11
AMBRA1-211ENST00000533727 HCFC1P51610 2035 aa8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 USP9YO00507 2555 aaPredicted RBP8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 TLN2Q9Y4G6 2542 aa8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 LINC00526Q96FQ7 95 aa8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
AMBRA1-211ENST00000533727 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 TSHBP01222 138 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 H0Y9J4 135 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 POLR2KP53803 58 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 Q6JHZ5 121 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 NRACQ8N912 160 aa8.12□□□□□ -1.11
AMBRA1-211ENST00000533727 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
AMBRA1-211ENST00000533727 SEC61GP60059 68 aa8.1□□□□□ -1.11
AMBRA1-211ENST00000533727 LOC100131303A0A0U1RQF7 123 aa8.1□□□□□ -1.11
AMBRA1-211ENST00000533727 EDN2P20800 178 aa8.1□□□□□ -1.11
AMBRA1-211ENST00000533727 UBE2D1P51668 147 aa8.1□□□□□ -1.11
AMBRA1-211ENST00000533727 COX17Q14061 63 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 FAM19A5Q7Z5A7 132 aaPredicted RBP8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 IGKV4-1P06312 121 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 FHL2Q14192 279 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 C6orf99Q4VX62 202 aa8.09□□□□□ -1.11
AMBRA1-211ENST00000533727 A6NED7 52 aa8.09□□□□□ -1.12
AMBRA1-211ENST00000533727 M0R378 163 aa8.08□□□□□ -1.12
AMBRA1-211ENST00000533727 Q8IZM0 81 aa8.08□□□□□ -1.12
AMBRA1-211ENST00000533727 SPATA3Q8NHX4 192 aa8.08□□□□□ -1.12
AMBRA1-211ENST00000533727 CCKP06307 115 aa8.08□□□□□ -1.12
AMBRA1-211ENST00000533727 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
AMBRA1-211ENST00000533727 IGLV5-52A0A0A0MRZ9 124 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 A8MZ25 164 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 LRCOL1A6NCL2 159 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 EGFEM1PQ0D2K5 195 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms