RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 TIRAPP58753 221 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 CLPSL2Q6UWE3 100 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 IGLV4-60A0A075B6I1 120 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 SCGB1A1P11684 91 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 HERVK_113P63121 156 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
C11orf54-207ENST00000528288 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 COX6CP09669 75 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 IL17DQ8TAD2 202 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 UBE2WQ96B02 151 aa5.28□□□□□ -1.56
C11orf54-207ENST00000528288 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 A0A1B0GV72 72 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 DEFB4AO15263 64 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 C5orf38Q86SI9 138 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 TRAV8-4A0A0B4J246 113 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 RNF183Q96D59 192 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 TMEM243Q9BU79 118 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 LRRC75A-AS1Q8N1F1 130 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
C11orf54-207ENST00000528288 F5H768 121 aa5.26□□□□□ -1.57
C11orf54-207ENST00000528288 PFN2P35080 140 aa5.26□□□□□ -1.57
C11orf54-207ENST00000528288 DAZ2Q13117 558 aaKnown RBP5.26□□□□□ -1.57
C11orf54-207ENST00000528288 DAZ4Q86SG3 579 aaKnown RBP5.26□□□□□ -1.57
C11orf54-207ENST00000528288 DAZ3Q9NR90 486 aaKnown RBP5.26□□□□□ -1.57
C11orf54-207ENST00000528288 TRAV25A0A0B4J276 109 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 LST1O00453 97 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 KRTAP1-1Q07627 177 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 C15orf53Q8NAA6 179 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 Q9HAA7 133 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 TENM1Q9UKZ4 2725 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 TMEM262E9PQX1 116 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 C19orf73Q9NVV2 129 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 TEX29Q8N6K0 151 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
C11orf54-207ENST00000528288 SNCGO76070 127 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 LINC00158P58513 81 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 CLUHP3Q96NS8 147 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 TRBV10-1A0A0K0K1A3 114 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 ATRQ13535 2644 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 IFITM1P13164 125 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 FHL2Q14192 279 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 Q8N3U1 123 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 TMEM86BQ8N661 226 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 TRRAPQ9Y4A5 3859 aa5.24□□□□□ -1.57
C11orf54-207ENST00000528288 TIMM17BO60830 172 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 IGLV1-51P01701 117 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 KRTAP10-3P60369 221 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 CSNK1G2-AS1Q8NCQ2 148 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 C16orf74Q96GX8 76 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 XCL1P47992 114 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 GAGE2BQ13066 116 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 GAGE2EQ4V326 116 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 GAGE2DQ9UEU5 116 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
C11orf54-207ENST00000528288 LINC00337Q8N6G1 96 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 CITED1Q99966 193 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 TRBV6-8A0A0A6YYG3 113 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 ATP5G1P05496 136 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 GYPEP15421 78 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 IGLV10-54A0A075B6I4 117 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 PF4P02776 101 aa5.22□□□□□ -1.57
C11orf54-207ENST00000528288 COX7A2LO14548 114 aa5.21□□□□□ -1.57
C11orf54-207ENST00000528288 SND1-IT1Q9HBX3 110 aa5.21□□□□□ -1.57
C11orf54-207ENST00000528288 CSDC2Q9Y534 153 aaKnown RBP5.21□□□□□ -1.57
C11orf54-207ENST00000528288 BAALC-AS2P0C853 105 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
C11orf54-207ENST00000528288 OR13C6PQ8NH95 151 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 TRBV6-4A0A1B0GX49 114 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 H3BT86 120 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
C11orf54-207ENST00000528288 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
C11orf54-207ENST00000528288 NHLRC4P0CG21 123 aaPredicted RBP5.2□□□□□ -1.58
C11orf54-207ENST00000528288 C3orf56Q8N813 242 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 CCL18P55774 89 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 SHISA2Q6UWI4 295 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 A0A087WYN8 130 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 M0QXV9 152 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 PAX4O43316 350 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 SLPIP03973 132 aa5.2□□□□□ -1.58
C11orf54-207ENST00000528288 C9orf129Q5T035 196 aaKnown RBP5.2□□□□□ -1.58
C11orf54-207ENST00000528288 B5MCH6 92 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 CRPP02741 224 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 C6orf226Q5I0X4 101 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 IGHV3OR16-9A0A0B4J2B5 98 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 CCDC179H3BU77 68 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 DEFB135Q30KP9 77 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 OVOL2Q9BRP0 275 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 SS18L2Q9UHA2 77 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
C11orf54-207ENST00000528288 HTN3P15516 51 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms