RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 A8MZ25 164 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 COX6A2Q02221 97 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 GAGE6Q13070 117 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 TRBV20-1A0A075B6N2 111 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 J3QR89 54 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 PRIMA1Q86XR5 153 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TCL1BO95988 128 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 IGHV3-33P01772 117 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TIRAPP58753 221 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 Q8NAQ8 132 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 A0A096LPF7 62 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 RNF183Q96D59 192 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 MIFP14174 115 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SPANXDQ9BXN6 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SPANXCQ9NY87 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ERG28Q9UKR5 140 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 PKD1L1Q8TDX9 2849 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 DAD1P61803 113 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SHISA2Q6UWI4 295 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 PRSS2P07478 247 aa12.08□□□□□ -0.48
PCDHA6-202ENST00000527624 PAX4O43316 350 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 HERVK_113P63121 156 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 IGLV4-60A0A075B6I1 120 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 H7C423 109 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 IGKV3OR2-268A0A0C4DH90 116 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 MIAQ16674 131 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 H7C2G1 150 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 TIMM17BO60830 172 aa12.05□□□□□ -0.48
PCDHA6-202ENST00000527624 FOXI1Q12951 378 aa12.05□□□□□ -0.48
PCDHA6-202ENST00000527624 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 NDUFA1O15239 70 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 HTN3P15516 51 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 SVIPQ8NHG7 77 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 RETNQ9HD89 108 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 ATP5G1P05496 136 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 F5H768 121 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 Q1RN00 199 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
PCDHA6-202ENST00000527624 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
PCDHA6-202ENST00000527624 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 TEN1Q86WV5 123 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 IFITM1P13164 125 aa12□□□□□ -0.49
PCDHA6-202ENST00000527624 NPC2P61916 151 aa12□□□□□ -0.49
PCDHA6-202ENST00000527624 SIGMAR1Q99720 223 aa11.99□□□□□ -0.49
PCDHA6-202ENST00000527624 Q9H8V8 135 aa11.99□□□□□ -0.49
PCDHA6-202ENST00000527624 TRIAP1O43715 76 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 PPDPFLQ8WWR9 84 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 DAND5Q8N907 189 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 C9JAW5 83 aa11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 SLC25A20O43772 301 aa11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 M0QXV9 152 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 ATXN8Q156A1 80 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 CMYA5Q8N3K9 4069 aa11.96□□□□□ -0.5
PCDHA6-202ENST00000527624 ANKRD29Q8N6D5 301 aa11.95□□□□□ -0.5
PCDHA6-202ENST00000527624 ANK2Q01484 3957 aa11.95□□□□□ -0.5
PCDHA6-202ENST00000527624 Q8N3U1 123 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC01620Q4KN68 170 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
PCDHA6-202ENST00000527624 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 COX6CP09669 75 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms