RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 SIP14410 1827 aa4.81□□□□□ -1.64
LIN7C-202ENST00000524596 PCNX2A6NKB5 2137 aa4.81□□□□□ -1.64
LIN7C-202ENST00000524596 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 LHBP01229 141 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 IGKV2-29A2NJV5 120 aaPredicted RBP4.8□□□□□ -1.64
LIN7C-202ENST00000524596 POLR2KP53803 58 aaKnown RBP4.8□□□□□ -1.64
LIN7C-202ENST00000524596 CXCL17Q6UXB2 119 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 MGAMO43451 1857 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 FNDC1Q4ZHG4 1894 aaPredicted RBP4.8□□□□□ -1.64
LIN7C-202ENST00000524596 KIAA1549LQ6ZVL6 1849 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 TRBV6-4A0A1B0GX49 114 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 IGHV3-23P01764 117 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 IGHV4-38-2P0DP08 117 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
LIN7C-202ENST00000524596 LY6G6EA0A0G2JKS1 128 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 IGLV3-12A0A075B6K2 115 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 ROMO1P60602 79 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 ARTNQ5T4W7 220 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 PLA2G2DQ9UNK4 145 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 PRRC2AP48634 2157 aaKnown RBP4.79□□□□□ -1.64
LIN7C-202ENST00000524596 IGHV3-53P01767 116 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 C18orf65Q6ZTR6 163 aa4.79□□□□□ -1.64
LIN7C-202ENST00000524596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.78□□□□□ -1.64
LIN7C-202ENST00000524596 DSCR9P59020 149 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 LINC00242Q5T6M2 205 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 COX14Q96I36 57 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 AMELXQ99217 191 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 TPRP12270 2363 aaKnown RBP4.78□□□□□ -1.64
LIN7C-202ENST00000524596 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 MINOS1Q5TGZ0 78 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 DSCAMO60469 2012 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 PLXNA2O75051 1894 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 A8MWP4 228 aa4.78□□□□□ -1.64
LIN7C-202ENST00000524596 IGLV3-9A0A075B6K5 115 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 OBSCN-AS1Q96MR7 158 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 RNF5Q99942 180 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 MYO16Q9Y6X6 1858 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 DHRS4-AS1Q9P1J3 65 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV5-37A0A075B6J1 123 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 NOTCH4Q99466 2003 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 PAPPA2Q9BXP8 1791 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV10-54A0A075B6I4 117 aa4.77□□□□□ -1.65
LIN7C-202ENST00000524596 TNRC18O15417 2968 aaPredicted RBP4.76□□□□□ -1.65
LIN7C-202ENST00000524596 B4DSR2 109 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 CCL18P55774 89 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV8-61A0A075B6I0 122 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 C4orf3Q8WVX3 66 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 ZFAND2AQ8N6M9 145 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 C19orf73Q9NVV2 129 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 FAM215AQ9Y5M1 114 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 EML5Q05BV3 1969 aa4.76□□□□□ -1.65
LIN7C-202ENST00000524596 IGHV3OR16-8A0A075B7F1 116 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 SPTY2D1-AS1A0A0U1RR47 76 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 Q8NAQ8 132 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 A0A0G2JMZ2 1700 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 LRRC37A2A6NM11 1700 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 CTSGP08311 255 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 PKDREJQ9NTG1 2253 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV1-51P01701 117 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 DEFB105AQ8NG35 78 aa4.75□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.74□□□□□ -1.65
LIN7C-202ENST00000524596 SMIM1B2RUZ4 78 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 ACYP2P14621 99 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 CACNA1EQ15878 2313 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV11-55A0A075B6I3 123 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 DEFB113Q30KQ7 82 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 LINC01006Q8NI28 216 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 LITAFQ99732 161 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 IGKV3-20P01619 116 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 PRO3102Q9H379 93 aa4.74□□□□□ -1.65
LIN7C-202ENST00000524596 PCOTHQ58A44 107 aa4.73□□□□□ -1.65
LIN7C-202ENST00000524596 PTPRQQ9UMZ3 2332 aa4.73□□□□□ -1.65
LIN7C-202ENST00000524596 IGLV1-50A0A075B6I6 118 aa4.73□□□□□ -1.65
LIN7C-202ENST00000524596 Q6ZPA2 131 aa4.73□□□□□ -1.65
LIN7C-202ENST00000524596 F5P12259 2224 aa4.73□□□□□ -1.65
LIN7C-202ENST00000524596 TSHBP01222 138 aa4.72□□□□□ -1.65
LIN7C-202ENST00000524596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.72□□□□□ -1.655e-8■■□□□ 12.4
LIN7C-202ENST00000524596 LINC00167Q96N53 147 aa4.72□□□□□ -1.65
LIN7C-202ENST00000524596 CEP250Q9BV73 2442 aa4.72□□□□□ -1.65
LIN7C-202ENST00000524596 TLX1NBP0CAT3 122 aa4.72□□□□□ -1.65
LIN7C-202ENST00000524596 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
LIN7C-202ENST00000524596 PLA2G2CQ5R387 149 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 TRGV1A0A0A0MS02 117 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 BRWD1-AS2P59051 145 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 UTRNP46939 3433 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 SPTBN2O15020 2390 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 SRRM5B3KS81 715 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 CCL5P13501 91 aa4.71□□□□□ -1.66
LIN7C-202ENST00000524596 COL5A1P20908 1838 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms