RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SPART-AS1	P0CW21	52 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	LINC00694	P0DN24	101 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	NTM-AS1	Q6ZSK4	140 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	PGPEP1	Q9NXJ5	209 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	CDKN2A-AS1	Q9UH64	79 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGLV5-45	A0A087WSX0	123 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006		A0A0J9YXY3	114 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGLL5	B9A064	214 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	ATP5G1	P05496	136 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGHV4-30-4	P0DP06	118 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	SMCP	P49901	116 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006		Q1RN00	199 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	ZFAND6	Q6FIF0	208 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	WFDC9	Q8NEX5	89 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006	CDC42SE2	Q9NRR3	84 aa		7.6	□□□□□ -1.19
SPIDR-222	ENST00000524006		A0A1B0GWB2	263 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	TMEM262	E9PQX1	116 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	NDUFA1	O15239	70 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGHV3-30	P01768	117 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGHV3-30-5	P0DP03	117 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	HTN3	P15516	51 aa		7.59	□□□□□ -1.19
SPIDR-222	ENST00000524006	LOC107984156	A0A0G2JMH3	177 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006		F5H768	121 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	DEFB4A	O15263	64 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	TIMM17B	O60830	172 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	PRSS2	P07478	247 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	PSMB2	P49721	201 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	MEIG1	Q5JSS6	88 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	LINC00242	Q5T6M2	205 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	SH2D6	Q7Z4S9	175 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	FAM19A3	Q7Z5A8	133 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	ARL17A	Q8IVW1	177 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	FAM104A	Q969W3	186 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	RNF183	Q96D59	192 aa		7.58	□□□□□ -1.2
SPIDR-222	ENST00000524006	SS18	Q15532	418 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	MIA	Q16674	131 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	C10orf126	Q8N4M7	172 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	SPANXD	Q9BXN6	97 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	SPANXC	Q9NY87	97 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	PRO1854	Q9UHT4	67 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	RYR3	Q15413	4870 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006	DNAH9	Q9NYC9	4486 aa		7.57	□□□□□ -1.2
SPIDR-222	ENST00000524006		A0A0B4J2C4	111 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006		A4D1N5	150 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006	SCGB1C2	P0DMR2	95 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006	IFITM1	P13164	125 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006	HERV-K104	P63124	156 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006		Q9H8V8	135 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006	ICOS	Q9Y6W8	199 aa		7.56	□□□□□ -1.2
SPIDR-222	ENST00000524006	SMIM1	B2RUZ4	78 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	TSPAN13	O95857	204 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	COX6A2	Q02221	97 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	MRPL23	Q16540	153 aa	Known RBP	7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	MUSTN1	Q8IVN3	82 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006		Q8NAQ8	132 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	TOMM7	Q9P0U1	55 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	ERG28	Q9UKR5	140 aa		7.55	□□□□□ -1.2
SPIDR-222	ENST00000524006	TRAV26-1	A0A087WT03	109 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006		A0A096LPF7	62 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006	IGLV5-39	A0A0G2JS06	123 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006		H7C2G1	150 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006		K7ERU9	68 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006	SFTA2	Q6UW10	78 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006	COX7B2	Q8TF08	81 aa		7.54	□□□□□ -1.2
SPIDR-222	ENST00000524006		A8MZ25	164 aa		7.53	□□□□□ -1.2
SPIDR-222	ENST00000524006	NPC2	P61916	151 aa		7.53	□□□□□ -1.2
SPIDR-222	ENST00000524006	OXLD1	Q5BKU9	147 aa		7.53	□□□□□ -1.2
SPIDR-222	ENST00000524006	IGLV4-60	A0A075B6I1	120 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	TRBV20-1	A0A075B6N2	111 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	CFC1B	P0CG36	223 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	CFC1	P0CG37	223 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	RBX1	P62877	108 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	C4orf48	Q5BLP8	95 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006	CELA1	Q9UNI1	258 aa		7.52	□□□□□ -1.21
SPIDR-222	ENST00000524006		A0A1B0GUV1	79 aa		7.51	□□□□□ -1.21
SPIDR-222	ENST00000524006	COX6C	P09669	75 aa		7.51	□□□□□ -1.21
SPIDR-222	ENST00000524006	RNF151	Q2KHN1	245 aa		7.51	□□□□□ -1.21
SPIDR-222	ENST00000524006	ZNF625	Q96I27	306 aa	Predicted RBP	7.51	□□□□□ -1.21
SPIDR-222	ENST00000524006	TENM3	Q9P273	2699 aa		7.51	□□□□□ -1.21
SPIDR-222	ENST00000524006	LINC00959	A0A1B0GUT2	108 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006		F8W1H4	67 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006		J3QR89	54 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006	ANG	P03950	147 aa	Known RBP	7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006	XCL1	P47992	114 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006	OCIAD2	Q56VL3	154 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006	CLPSL2	Q6UWE3	100 aa		7.5	□□□□□ -1.21
SPIDR-222	ENST00000524006		A0A0U1RRA0	63 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006		H3BMG7	143 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006	RPL13A	P40429	203 aa	Known RBP	7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006	EGFEM1P	Q0D2K5	195 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006	CFAP161	Q6P656	301 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006	LITAF	Q99732	161 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006	RETN	Q9HD89	108 aa		7.49	□□□□□ -1.21
SPIDR-222	ENST00000524006		A0A087WZ39	114 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	IGHV3-33	P01772	117 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	MAL	P21145	153 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	KRTAP10-11	P60412	298 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	COL7A1	Q02388	2944 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	LELP1	Q5T871	98 aa		7.48	□□□□□ -1.21
SPIDR-222	ENST00000524006	C5orf38	Q86SI9	138 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms