RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
PVT1-217ENST00000523190 TRAV13-1A0A0B4J241 112 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 TRAV8-6A0A0B4J262 113 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
PVT1-217ENST00000523190 PCP4P48539 62 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 NFE4Q86UQ8 179 aa4.6□□□□□ -1.67
PVT1-217ENST00000523190 DNHD1Q96M86 4753 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGKV2D-26A0A0A0MRZ7 120 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 A0A1B0GUV1 79 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 TINCRA0A1B0GVN0 87 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 H3BRM9 83 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGHV3-30P01768 117 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 ANGP03950 147 aaKnown RBP4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGHV3-30-3P0DP02 117 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGHV3-30-5P0DP03 117 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 HIGD1BQ9P298 99 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 TP73-AS1Q9UF72 201 aa4.59□□□□□ -1.67
PVT1-217ENST00000523190 IGHV3-64A0A075B6Q5 118 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 NMUP48645 174 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 HERVK_113P61574 105 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 COX6A2Q02221 97 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 HSD52Q0P140 79 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 LINC00242Q5T6M2 205 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 GEMIN7Q9H840 131 aaKnown RBP4.58□□□□□ -1.68
PVT1-217ENST00000523190 LINC00588Q9Y4M8 146 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
PVT1-217ENST00000523190 LINC00959A0A1B0GUT2 108 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 NUPR2A6NF83 97 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 C9orf118A6NHY6 69 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 E9PLD3 99 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 SPINK8P0C7L1 97 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 HERVK_113P63121 156 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 REG3AQ06141 175 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 Q6ZVH6 145 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 LINC00269Q8N2A0 174 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 TTTY13Q9BZ97 58 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 CDKN2A-AS1Q9UH64 79 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 KLK12Q9UKR0 248 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
PVT1-217ENST00000523190 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 TRAV8-3A0A0A6YYJ7 113 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 K7ERU9 68 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 CCL18P55774 89 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 SS18Q15532 418 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 VAMP3Q15836 100 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 ZFAND6Q6FIF0 208 aa4.56□□□□□ -1.68
PVT1-217ENST00000523190 A6NDN8 102 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 B5MCH6 92 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 K7EP34 96 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 LEPROTO15243 131 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 CRPP02741 224 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 XCL1P47992 114 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 MAPKAPK5-AS1Q8N8E1 139 aa4.55□□□□□ -1.68
PVT1-217ENST00000523190 KLK5Q9Y337 293 aaPredicted RBP4.55□□□□□ -1.68
PVT1-217ENST00000523190 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 SMIM1B2RUZ4 78 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 J3QQQ9 107 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 DNAH10OSP0CZ25 163 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
PVT1-217ENST00000523190 GTF2H5Q6ZYL4 71 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 C5orf38Q86SI9 138 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
PVT1-217ENST00000523190 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 PLEKHB2Q96CS7 222 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 UPK3BQ9BT76 320 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
PVT1-217ENST00000523190 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 ZNF815PA8K554 130 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 TAL2Q16559 108 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 FAM30AQ9NZY2 134 aa4.53□□□□□ -1.68
PVT1-217ENST00000523190 A0A087WZ39 114 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 MYMXA0A1B0GTQ4 84 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 A0A1W2PPM0 123 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 GAGE10A6NGK3 116 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 FOXI1Q12951 378 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 MIAQ16674 131 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 CD164L2Q6UWJ8 174 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 MUC7Q8TAX7 377 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 Q9H8V8 135 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 TOMM7Q9P0U1 55 aa4.52□□□□□ -1.69
PVT1-217ENST00000523190 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
PVT1-217ENST00000523190 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms