RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.39□□□□□ -1.392e-11■□□□□ 10.7
PVT1-217ENST00000523190 U2AF2P26368 475 aaKnown RBP eCLIP7.73□□□□□ -1.176e-10■■■■■ 29.1
PVT1-217ENST00000523190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.28□□□□□ -1.243e-9■■■■■ 260.8
PVT1-217ENST00000523190 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.254e-9■■■■□ 19.5
PVT1-217ENST00000523190 PTBP1P26599 531 aaKnown RBP eCLIP5.75□□□□□ -1.495e-9■■■□□ 18.7
PVT1-217ENST00000523190 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.346e-9■■■■□ 19.9
PVT1-217ENST00000523190 U2AF1Q01081 240 aaKnown RBP eCLIP8.93□□□□□ -0.989e-9■■■■■ 30
PVT1-217ENST00000523190 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.289e-9■■■■■ 53.3
PVT1-217ENST00000523190 TAF15Q92804 592 aaKnown RBP eCLIP5.31□□□□□ -1.561e-8■■■■■ 27.8
PVT1-217ENST00000523190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.83□□□□□ -1.161e-8■□□□□ 9.5
PVT1-217ENST00000523190 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.281e-8■□□□□ 9.2
PVT1-217ENST00000523190 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.34□□□□□ -1.231e-8■□□□□ 8.4
PVT1-217ENST00000523190 DDX3XO00571 662 aaKnown RBP eCLIP7.21□□□□□ -1.263e-8■□□□□ 10.9
PVT1-217ENST00000523190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.36□□□□□ -1.233e-8■□□□□ 9.9
PVT1-217ENST00000523190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.563e-8■■■■■ 29.9
PVT1-217ENST00000523190 DKC1O60832 514 aaKnown RBP eCLIP7.46□□□□□ -1.229e-8■■■■■ 74
PVT1-217ENST00000523190 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.71e-7■□□□□ 9.5
PVT1-217ENST00000523190 YBX3P16989 372 aaKnown RBP eCLIP7.89□□□□□ -1.151e-7■■□□□ 11.9
PVT1-217ENST00000523190 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.22□□□□□ -1.252e-7■■■■■ 28.4
PVT1-217ENST00000523190 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.242e-7■■■■□ 25.4
PVT1-217ENST00000523190 TARDBPQ13148 414 aaKnown RBP eCLIP6.22□□□□□ -1.413e-7■■■■■ 27.8
PVT1-217ENST00000523190 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.815e-7■■■■■ 33.6
PVT1-217ENST00000523190 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.495e-7■■□□□ 12.7
PVT1-217ENST00000523190 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.286e-7■■■■■ 34.9
PVT1-217ENST00000523190 PCBP2Q15366 365 aaKnown RBP eCLIP6.56□□□□□ -1.367e-7■■■■■ 35.3
PVT1-217ENST00000523190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.967e-7■■■□□ 17.6
PVT1-217ENST00000523190 QKIQ96PU8 341 aaKnown RBP eCLIP6.93□□□□□ -1.38e-7■■■■□ 19.5
PVT1-217ENST00000523190 SFPQP23246 707 aaKnown RBP eCLIP7.33□□□□□ -1.249e-7■■□□□ 12.4
PVT1-217ENST00000523190 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.679e-7■■■■■ 33.4
PVT1-217ENST00000523190 HNRNPKP61978 463 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■■□□ 14.8
PVT1-217ENST00000523190 PABPC4Q13310 644 aaKnown RBP eCLIP7.6□□□□□ -1.191e-6■■■■□ 20.8
PVT1-217ENST00000523190 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.01□□□□□ -1.291e-6■■■□□ 18.2
PVT1-217ENST00000523190 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.76□□□□□ -1.332e-6■■■■□ 22.1
PVT1-217ENST00000523190 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■□ 23.1
PVT1-217ENST00000523190 ILF3Q12906 894 aaKnown RBP eCLIP6.51□□□□□ -1.372e-6■■■□□ 17.4
PVT1-217ENST00000523190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■□□□□ 9.5
PVT1-217ENST00000523190 TIAL1Q01085 375 aaKnown RBP eCLIP6.67□□□□□ -1.343e-6■■■■□ 20.6
PVT1-217ENST00000523190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.8□□□□□ -0.843e-6■□□□□ 10.5
PVT1-217ENST00000523190 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.31□□□□□ -1.243e-6■■□□□ 13.5
PVT1-217ENST00000523190 PRPF4O43172 522 aaKnown RBP eCLIP6.71□□□□□ -1.345e-6■■■■□ 21.2
PVT1-217ENST00000523190 SRSF1Q07955 248 aaKnown RBP eCLIP5.64□□□□□ -1.515e-6■□□□□ 9
PVT1-217ENST00000523190 SRSF7Q16629 238 aaKnown RBP eCLIP5.61□□□□□ -1.516e-6■■■■□ 19.6
PVT1-217ENST00000523190 SF3B1O75533 1304 aaKnown RBP eCLIP7.08□□□□□ -1.289e-6■■■■■ 68.9
Retrieved 43 of 43 RNA–protein pairs in 10.5 ms