RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 SMIM17P0DL12 118 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 RAB4BP61018 213 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 C10orf91Q5T1B1 145 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 BORCS7Q96B45 105 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 SEC11CQ9BY50 192 aa3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 CARHSP1Q9Y2V2 147 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-232ENST00000522013 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV10-1A0A0K0K1A3 114 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 M0QY20 66 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 HSBP1O75506 76 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 UBE2D3P61077 147 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 UBE2D2P62837 147 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV7-3A0A075B6L6 115 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 A0A1B0GXF2 115 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 C7orf77A4D0Y5 90 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 H7C1H1 209 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 APOC3P02656 99 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 KRTAP10-8P60410 259 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 PRR4Q16378 134 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 SMIM15Q7Z3B0 74 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 AMN1Q8IY45 258 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 SLC7A5P1Q8MH63 180 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 Q8N976 141 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 RNF185Q96GF1 192 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 TMEM191AQ9H0A3 160 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 GTSF1LQ9H1H1 148 aa3.13□□□□□ -1.91
CTNNA1-232ENST00000522013 A0A1B0GW15 77 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 S100A8P05109 93 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 RAB4AP20338 218 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 HBBP68871 147 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 LINC01556Q5JQF7 62 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 OR10J3Q5JRS4 329 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 FAM104BQ5XKR9 115 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 RPL39LQ96EH5 51 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 DNAJC30Q96LL9 226 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 IMMP2LQ96T52 175 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 NIT2Q9NQR4 276 aa3.12□□□□□ -1.91
CTNNA1-232ENST00000522013 IGLV8-61A0A075B6I0 122 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 A0A087WWC5 75 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 TRAV8-6A0A0B4J262 113 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV6-5A0A0K0K1A5 114 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 SNAPINO95295 136 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 NCR2O95944 276 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 RPS10P46783 165 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 CXCL6P80162 114 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 RHEBQ15382 184 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 MRPL51Q4U2R6 128 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 NTM-AS1Q6ZSK4 140 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 ATP5L2Q7Z4Y8 100 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 DAZ4Q86SG3 579 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 CHCHD10Q8WYQ3 142 aaPredicted RBP3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 DPH3Q96FX2 82 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 MRAP2Q96G30 205 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 BTF3L4Q96K17 158 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 KIR2DL4Q99706 377 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 RPS10P5Q9NQ39 176 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 TMEM242Q9NWH2 141 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 URGCP-MRPS24S4R325 110 aa3.11□□□□□ -1.91
CTNNA1-232ENST00000522013 TRAV9-1A0A075B6T8 112 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV6-8A0A0A6YYG3 113 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 HSBP1L1C9JCN9 74 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 PHOX2AO14813 284 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 PMCHP20382 165 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 CKS2P33552 79 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 NIT1Q86X76 327 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 SVBPQ8N300 66 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 ST20Q9HBF5 79 aa3.1□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV25-1A0A075B6N4 114 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 IGKV2D-24A0A075B6R9 120 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 TRAV8-3A0A0A6YYJ7 113 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 IGHV1-24A0A0C4DH33 117 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 D6R8Y8 96 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 TMEM262E9PQX1 116 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 I3L3M4 83 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 PPP1R17O96001 155 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 NPYP01303 97 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 S100PP25815 95 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 POLR2KP53803 58 aaKnown RBP3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 COTL1Q14019 142 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 HIGD2BQ4VC39 106 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 TMEM97Q5BJF2 176 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 C7orf33Q8WU49 177 aa3.09□□□□□ -1.91
CTNNA1-232ENST00000522013 TRBV24-1A0A075B6N3 115 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms