RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ATOX1O00244 68 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 PRB1P04280 392 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 CD28P10747 220 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 INSL3P51460 131 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 SEC61GP60059 68 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 HERVK_113P63121 156 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
SDC2-204ENST00000519914 ATXN8Q156A1 80 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 DEFB136Q30KP8 78 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 C1orf158Q8N1D5 194 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 CARD19Q96LW7 228 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 LITAFQ99732 161 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.61□□□□□ -1.83
SDC2-204ENST00000519914 TRAV4A0A0B4J268 109 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 LOC107984156A0A0G2JMH3 177 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 A0A0J9YXV3 536 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 H3BT86 120 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 SLC25A20O43772 301 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 IGHV3-30-3P0DP02 117 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 COX7CP15954 63 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
SDC2-204ENST00000519914 LINC00643Q86TS7 51 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 ARL17AQ8IVW1 177 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
SDC2-204ENST00000519914 OPRPNQ99935 248 aaPredicted RBP3.61□□□□□ -1.83
SDC2-204ENST00000519914 PRO1854Q9UHT4 67 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 USP24Q9UPU5 2620 aa3.61□□□□□ -1.83
SDC2-204ENST00000519914 UBR5O95071 2799 aaPredicted RBP3.61□□□□□ -1.83
SDC2-204ENST00000519914 IGLV5-39A0A0G2JS06 123 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 TRBV30A0A0K0K1B3 111 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 H7C423 109 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 CCL24O00175 119 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 NDUFC2O95298 119 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 COX6CP09669 75 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 PROK1P58294 105 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 DEFB121Q5J5C9 76 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 DAZ4Q86SG3 579 aaKnown RBP3.6□□□□□ -1.83
SDC2-204ENST00000519914 VSIG2Q96IQ7 327 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 ESM1Q9NQ30 184 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 DAZ3Q9NR90 486 aaKnown RBP3.6□□□□□ -1.83
SDC2-204ENST00000519914 FLNCQ14315 2725 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 FAM208BQ5VWN6 2430 aa3.6□□□□□ -1.83
SDC2-204ENST00000519914 K7EQD1 137 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 NDUFA1O15239 70 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 TCL1BO95988 128 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 GIG44P09565 113 aaPredicted RBP3.59□□□□□ -1.83
SDC2-204ENST00000519914 MIAQ16674 131 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 MUSTN1Q8IVN3 82 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 STHQ8IWL8 128 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 UBE2WQ96B02 151 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 OVOL2Q9BRP0 275 aa3.59□□□□□ -1.83
SDC2-204ENST00000519914 CELSR2Q9HCU4 2923 aa3.59□□□□□ -1.84
SDC2-204ENST00000519914 CSMD2Q7Z408 3487 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 IGHV3OR16-12A0A075B7B8 117 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 IGHV3-73A0A0B4J1V6 119 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
SDC2-204ENST00000519914 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 WFDC11Q8NEX6 87 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 LINC01006Q8NI28 216 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 RPL36ALQ969Q0 106 aaKnown RBP3.58□□□□□ -1.84
SDC2-204ENST00000519914 DPH3Q96FX2 82 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 C16orf74Q96GX8 76 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 Q9UF83 564 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 MYO18BQ8IUG5 2567 aa3.58□□□□□ -1.84
SDC2-204ENST00000519914 UTP20O75691 2785 aaKnown RBP3.58□□□□□ -1.84
SDC2-204ENST00000519914 TEP1Q99973 2627 aaKnown RBP3.58□□□□□ -1.84
SDC2-204ENST00000519914 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
SDC2-204ENST00000519914 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 TRBV6-4A0A1B0GX49 114 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
SDC2-204ENST00000519914 HILS1P60008 231 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 KHDC1LQ5JSQ8 128 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 LINC00612Q8N6U2 182 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 DEFB104AQ8WTQ1 72 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 XCL2Q9UBD3 114 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 LRRK2Q5S007 2527 aa3.57□□□□□ -1.84
SDC2-204ENST00000519914 GCN1Q92616 2671 aaKnown RBP3.56□□□□□ -1.84
SDC2-204ENST00000519914 MXRA5Q9NR99 2828 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 TRGV1A0A0A0MS02 117 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 TRAV8-3A0A0A6YYJ7 113 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 PRM2P04554 102 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 HTN1P15515 57 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 CEMP1Q6PRD7 247 aaPredicted RBP3.56□□□□□ -1.84
SDC2-204ENST00000519914 NTM-AS1Q6ZSK4 140 aa3.56□□□□□ -1.84
SDC2-204ENST00000519914 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.56□□□□□ -1.84
SDC2-204ENST00000519914 ZNF625Q96I27 306 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms