RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 NEXN-AS1Q8NBZ9 246 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 LRP1BQ9NZR2 4599 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 RYR1P21817 5038 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 TRAV8-3A0A0A6YYJ7 113 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 PSCAO43653 123 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 BCL2P10415 239 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 LAGE3Q14657 143 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 Q8N976 141 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
HDAC3-215ENST00000519474 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 F5H697 171 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 WFDC2Q14508 124 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 ZNF56Q15929 161 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 LYZL1Q6UWQ5 148 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 NTM-AS1Q6ZSK4 140 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 Q8N814 137 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 EIF5A2Q9GZV4 153 aaKnown RBP6.19□□□□□ -1.42
HDAC3-215ENST00000519474 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
HDAC3-215ENST00000519474 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
HDAC3-215ENST00000519474 F2Z2F3 143 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 M0QY20 66 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 P01737 135 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 MPV17L2Q567V2 206 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
HDAC3-215ENST00000519474 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
HDAC3-215ENST00000519474 DPM2O94777 84 aa6.17□□□□□ -1.42
HDAC3-215ENST00000519474 CACNG7P62955 275 aa6.17□□□□□ -1.42
HDAC3-215ENST00000519474 ENHOQ6UWT2 76 aa6.17□□□□□ -1.42
HDAC3-215ENST00000519474 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-215ENST00000519474 FAM30AQ9NZY2 134 aa6.17□□□□□ -1.42
HDAC3-215ENST00000519474 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 LECT2O14960 151 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
HDAC3-215ENST00000519474 Q5XG85 94 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
HDAC3-215ENST00000519474 CHCHD7Q9BUK0 85 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 HSPG2P98160 4391 aa6.16□□□□□ -1.42
HDAC3-215ENST00000519474 TRAV9-1A0A075B6T8 112 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 H3BMG7 143 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 UQCRQO14949 82 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 OXTP01178 125 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-215ENST00000519474 TMEM258P61165 79 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
HDAC3-215ENST00000519474 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 IGKV2D-24A0A075B6R9 120 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 MGPP08493 103 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 FOXA3P55318 350 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-215ENST00000519474 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 GTSF1Q8WW33 167 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 CHCHD5Q9BSY4 110 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 CNFNQ9BYD5 112 aa6.14□□□□□ -1.43
HDAC3-215ENST00000519474 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
HDAC3-215ENST00000519474 PCLOQ9Y6V0 5065 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 HERVK_113P63121 156 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 TWIST1Q15672 202 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 DEFB104AQ8WTQ1 72 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 RMI2Q96E14 147 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 DPH3P1Q9H4G8 78 aa6.13□□□□□ -1.43
HDAC3-215ENST00000519474 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
HDAC3-215ENST00000519474 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-215ENST00000519474 H7C1H1 209 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 SNCGO76070 127 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
HDAC3-215ENST00000519474 NMUP48645 174 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 HAMPP81172 84 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 KRTAP26-1Q6PEX3 210 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 PRR34Q9NV39 138 aa6.12□□□□□ -1.43
HDAC3-215ENST00000519474 TRBV25-1A0A075B6N4 114 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 IGHV1-24A0A0C4DH33 117 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 A8MWL6 223 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 IMUPQ9GZP8 106 aa6.11□□□□□ -1.43
HDAC3-215ENST00000519474 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 H3BUT2 72 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 J3QQQ9 107 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 MT-ND6P03923 174 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 CRYGAP11844 174 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 Q6ZSA8 131 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms