RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 SAR1AQ9NR31 198 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 CFTRP13569 1480 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 PRDM2Q13029 1718 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 C5P01031 1676 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 TRBV20-1A0A075B6N2 111 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 SMR3BP02814 79 aaPredicted RBP-0.05□□□□□ -2.42
SKP1-203ENST00000517625 APODP05090 189 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 CLLU1Q5K131 121 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 FAM74A4Q5TZK3 123 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 FAM213BQ8TBF2 198 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 TMEM242Q9NWH2 141 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 UNC13AQ9UPW8 1703 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 NKTRP30414 1462 aaKnown RBP-0.05□□□□□ -2.42
SKP1-203ENST00000517625 TEX14Q8IWB6 1497 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 MYH1P12882 1939 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 ITSN2Q9NZM3 1697 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 UBR3Q6ZT12 1888 aa-0.05□□□□□ -2.42
SKP1-203ENST00000517625 F5P12259 2224 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.06□□□□□ -2.425e-13■■□□□ 11.4
SKP1-203ENST00000517625 LRRC37AA6NMS7 1700 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 DOT1LQ8TEK3 1739 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 DNAH17Q9UFH2 4485 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 PIN1P1O15428 100 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 NCS1P62166 190 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 PYDC1Q8WXC3 89 aa-0.06□□□□□ -2.42
SKP1-203ENST00000517625 MRPL40Q9NQ50 206 aaKnown RBP-0.06□□□□□ -2.42
SKP1-203ENST00000517625 VPS13DQ5THJ4 4388 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 QRICH2Q9H0J4 1663 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 RAPGEF2Q9Y4G8 1499 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 A0A087WTM6 91 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 TFF1P04155 84 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 SLC48A1Q6P1K1 146 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 C4orf33Q8N1A6 199 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 COX7B2Q8TF08 81 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 SCP2D1Q9UJQ7 156 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 LSM2Q9Y333 95 aaKnown RBP-0.07□□□□□ -2.42
SKP1-203ENST00000517625 U3KQA8 63 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 KIF14Q15058 1648 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 SAMD9Q5K651 1589 aa-0.07□□□□□ -2.42
SKP1-203ENST00000517625 TRBV7-1A0A0A6YYK4 115 aa-0.08□□□□□ -2.42
SKP1-203ENST00000517625 DR1Q01658 176 aa-0.08□□□□□ -2.42
SKP1-203ENST00000517625 V9GYV3 84 aa-0.08□□□□□ -2.42
SKP1-203ENST00000517625 ABCA8O94911 1581 aa-0.08□□□□□ -2.42
SKP1-203ENST00000517625 DNAH2Q9P225 4427 aa-0.08□□□□□ -2.42
SKP1-203ENST00000517625 ZNF142P52746 1687 aaPredicted RBP-0.08□□□□□ -2.42
SKP1-203ENST00000517625 HELZP42694 1942 aaKnown RBP-0.09□□□□□ -2.42
SKP1-203ENST00000517625 OVOS2A0A0J9YW53 1432 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 OVOS2Q6IE36 1432 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 TRAV12-3A0A0B4J271 114 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 NMBP08949 121 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 NPC2P61916 151 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 LINC01545Q5VT33 79 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 C20orf197Q8N268 126 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 VSTM2AQ8TAG5 236 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 RGPD3A6NKT7 1758 aaPredicted RBP-0.09□□□□□ -2.42
SKP1-203ENST00000517625 RGPD4Q7Z3J3 1758 aa-0.09□□□□□ -2.42
SKP1-203ENST00000517625 PLEKHH2Q8IVE3 1493 aa-0.1□□□□□ -2.42
SKP1-203ENST00000517625 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.42
SKP1-203ENST00000517625 TOGARAM1Q9Y4F4 1720 aa-0.1□□□□□ -2.42
SKP1-203ENST00000517625 NCR2O95944 276 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 SPANXN1Q5VSR9 72 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 Q96NJ1 140 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 GSKIPQ9P0R6 139 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 ARHGEF12Q9NZN5 1544 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 MUC22E2RYF6 1773 aaPredicted RBP-0.1□□□□□ -2.43
SKP1-203ENST00000517625 UBR1Q8IWV7 1749 aa-0.1□□□□□ -2.43
SKP1-203ENST00000517625 TIAM1Q13009 1591 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 UGGT2Q9NYU1 1516 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 TSPAN19P0C672 248 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 INSL4Q14641 139 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 NDUFA12Q9UI09 145 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 MBD5Q9P267 1494 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 IQGAP1P46940 1657 aa-0.11□□□□□ -2.43
SKP1-203ENST00000517625 PRDM15P57071 1507 aaPredicted RBP-0.12□□□□□ -2.43
SKP1-203ENST00000517625 TMEM14DPA8MWL7 114 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 J3QR89 54 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 IGLC6P0CF74 106 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 ACYP2P14621 99 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 Q6ZRX8 168 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 AKAP14Q86UN6 197 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 BATF3Q9NR55 127 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 ANKRD30AQ9BXX3 1397 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 PLXNA2O75051 1894 aa-0.12□□□□□ -2.43
SKP1-203ENST00000517625 NRXN2Q9P2S2 1712 aa-0.13□□□□□ -2.43
SKP1-203ENST00000517625 LRRC9Q6ZRR7 1453 aa-0.13□□□□□ -2.43
SKP1-203ENST00000517625 IFNA17P01571 189 aa-0.13□□□□□ -2.43
SKP1-203ENST00000517625 C9orf116Q5BN46 136 aaPredicted RBP-0.13□□□□□ -2.43
SKP1-203ENST00000517625 RPRMQ9NS64 109 aa-0.13□□□□□ -2.43
SKP1-203ENST00000517625 GLI2P10070 1586 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 DNAH8Q96JB1 4490 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 A6NIN4 97 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 GCHFRP30047 84 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 RBM3P98179 157 aaKnown RBP-0.14□□□□□ -2.43
SKP1-203ENST00000517625 HIST1H1AQ02539 215 aaPredicted RBP-0.14□□□□□ -2.43
SKP1-203ENST00000517625 Q5VV11 94 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 MAGI3Q5TCQ9 1506 aa-0.14□□□□□ -2.43
SKP1-203ENST00000517625 MAGI1Q96QZ7 1491 aaPredicted RBP-0.15□□□□□ -2.43
SKP1-203ENST00000517625 TRGV1A0A0A0MS02 117 aa-0.15□□□□□ -2.43
SKP1-203ENST00000517625 C10orf142B7Z368 130 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms