RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
MTCL1-205ENST00000517570 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
MTCL1-205ENST00000517570 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
MTCL1-205ENST00000517570 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
MTCL1-205ENST00000517570 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
MTCL1-205ENST00000517570 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
MTCL1-205ENST00000517570 ZNF580Q9UK33 172 aa12.08□□□□□ -0.48
MTCL1-205ENST00000517570 PMAIP1Q13794 54 aa12.08□□□□□ -0.48
MTCL1-205ENST00000517570 C10orf25Q5T742 122 aa12.08□□□□□ -0.48
MTCL1-205ENST00000517570 M0R2N4 97 aa12.07□□□□□ -0.48
MTCL1-205ENST00000517570 ESRGQ1W209 222 aa12.07□□□□□ -0.48
MTCL1-205ENST00000517570 COL4A4P53420 1690 aaPredicted RBP12.07□□□□□ -0.48
MTCL1-205ENST00000517570 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
MTCL1-205ENST00000517570 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
MTCL1-205ENST00000517570 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
MTCL1-205ENST00000517570 TRBV10-3A0A0K0K1G6 114 aa12.06□□□□□ -0.48
MTCL1-205ENST00000517570 NCOA6Q14686 2063 aaPredicted RBP12.06□□□□□ -0.48
MTCL1-205ENST00000517570 ATG2AQ2TAZ0 1938 aa12.05□□□□□ -0.48
MTCL1-205ENST00000517570 PSPHP1O15172 72 aa12.04□□□□□ -0.48
MTCL1-205ENST00000517570 C1orf137Q5JT78 98 aa12.03□□□□□ -0.48
MTCL1-205ENST00000517570 A0A096LNJ9 63 aa12.02□□□□□ -0.48
MTCL1-205ENST00000517570 MRGPRG-AS1Q2M3A8 158 aa12.02□□□□□ -0.49
MTCL1-205ENST00000517570 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
MTCL1-205ENST00000517570 MUC7Q8TAX7 377 aa12.02□□□□□ -0.49
MTCL1-205ENST00000517570 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
MTCL1-205ENST00000517570 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
MTCL1-205ENST00000517570 Q8N3U1 123 aa12.01□□□□□ -0.49
MTCL1-205ENST00000517570 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
MTCL1-205ENST00000517570 REG3GQ6UW15 175 aa12□□□□□ -0.49
MTCL1-205ENST00000517570 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
MTCL1-205ENST00000517570 Q6ZVQ6 151 aa11.99□□□□□ -0.49
MTCL1-205ENST00000517570 AMELXQ99217 191 aa11.99□□□□□ -0.49
MTCL1-205ENST00000517570 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 TRBV7-6A0A0J9YX20 115 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 LY6G6DO95868 133 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 BEAN1Q3B7T3 259 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 PCOTHQ58A44 107 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 TANC2Q9HCD6 1990 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 IGHV6-1A0A0B4J1U7 121 aa11.98□□□□□ -0.49
MTCL1-205ENST00000517570 LINC01547P58512 204 aaPredicted RBP11.98□□□□□ -0.49
MTCL1-205ENST00000517570 SPTBN2O15020 2390 aa11.97□□□□□ -0.49
MTCL1-205ENST00000517570 LINC00575Q6W349 94 aa11.97□□□□□ -0.49
MTCL1-205ENST00000517570 C6orf223Q8N319 242 aa11.96□□□□□ -0.49
MTCL1-205ENST00000517570 Q6ZSN1 163 aa11.96□□□□□ -0.49
MTCL1-205ENST00000517570 MUC22E2RYF6 1773 aaPredicted RBP11.96□□□□□ -0.5
MTCL1-205ENST00000517570 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
MTCL1-205ENST00000517570 PCNX3Q9H6A9 2034 aa11.95□□□□□ -0.5
MTCL1-205ENST00000517570 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
MTCL1-205ENST00000517570 RETNQ9HD89 108 aa11.95□□□□□ -0.5
MTCL1-205ENST00000517570 CDIP1Q9H305 208 aa11.95□□□□□ -0.5
MTCL1-205ENST00000517570 ABCA1O95477 2261 aa11.94□□□□□ -0.5
MTCL1-205ENST00000517570 DEFB116Q30KQ4 102 aa11.94□□□□□ -0.5
MTCL1-205ENST00000517570 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
MTCL1-205ENST00000517570 LINC00846Q9NV44 126 aa11.94□□□□□ -0.5
MTCL1-205ENST00000517570 CACNA1BQ00975 2339 aa11.93□□□□□ -0.5
MTCL1-205ENST00000517570 H0Y9P7 68 aa11.93□□□□□ -0.5
MTCL1-205ENST00000517570 ODF3L2Q3SX64 289 aa11.93□□□□□ -0.5
MTCL1-205ENST00000517570 MED12LQ86YW9 2145 aa11.93□□□□□ -0.5
MTCL1-205ENST00000517570 RIF1Q5UIP0 2472 aaKnown RBP11.93□□□□□ -0.5
MTCL1-205ENST00000517570 FHL2Q14192 279 aa11.92□□□□□ -0.5
MTCL1-205ENST00000517570 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
MTCL1-205ENST00000517570 PCNX2A6NKB5 2137 aa11.92□□□□□ -0.5
MTCL1-205ENST00000517570 FREM1Q5H8C1 2179 aa11.92□□□□□ -0.5
MTCL1-205ENST00000517570 DOPEY2Q9Y3R5 2298 aa11.92□□□□□ -0.5
MTCL1-205ENST00000517570 A8MTW9 85 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 CRYGAP11844 174 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 Q9BRP9 147 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 AVPP01185 164 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 TMEM254Q8TBM7 123 aa11.9□□□□□ -0.5
MTCL1-205ENST00000517570 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.51
MTCL1-205ENST00000517570 CDSNQ15517 529 aa11.89□□□□□ -0.51
MTCL1-205ENST00000517570 SPTAN1Q13813 2472 aaKnown RBP11.88□□□□□ -0.51
MTCL1-205ENST00000517570 ABCA4P78363 2273 aa11.88□□□□□ -0.51
MTCL1-205ENST00000517570 HCFC1P51610 2035 aa11.87□□□□□ -0.51
MTCL1-205ENST00000517570 LY6G6CO95867 125 aa11.87□□□□□ -0.51
MTCL1-205ENST00000517570 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
MTCL1-205ENST00000517570 HCG22E2RYF7 251 aa11.86□□□□□ -0.51
MTCL1-205ENST00000517570 A0A087WSZ3 146 aa11.85□□□□□ -0.51
MTCL1-205ENST00000517570 SPINK1P00995 79 aa11.85□□□□□ -0.51
MTCL1-205ENST00000517570 EML5Q05BV3 1969 aa11.84□□□□□ -0.51
MTCL1-205ENST00000517570 X6R8D5 127 aa11.84□□□□□ -0.51
MTCL1-205ENST00000517570 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
MTCL1-205ENST00000517570 LINC00337Q8N6G1 96 aa11.83□□□□□ -0.52
MTCL1-205ENST00000517570 Q9UF83 564 aa11.83□□□□□ -0.52
MTCL1-205ENST00000517570 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
MTCL1-205ENST00000517570 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
MTCL1-205ENST00000517570 PCNX1Q96RV3 2341 aa11.81□□□□□ -0.52
MTCL1-205ENST00000517570 LINC01546A6NGU7 62 aa11.81□□□□□ -0.52
MTCL1-205ENST00000517570 CXCL6P80162 114 aa11.81□□□□□ -0.52
MTCL1-205ENST00000517570 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
MTCL1-205ENST00000517570 SMIM29Q86T20 159 aa11.8□□□□□ -0.52
MTCL1-205ENST00000517570 BRI3O95415 125 aa11.8□□□□□ -0.52
MTCL1-205ENST00000517570 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
MTCL1-205ENST00000517570 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
MTCL1-205ENST00000517570 CEP192Q8TEP8 1941 aa11.79□□□□□ -0.52
MTCL1-205ENST00000517570 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
MTCL1-205ENST00000517570 C4orf26Q17RF5 130 aa11.78□□□□□ -0.52
MTCL1-205ENST00000517570 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
MTCL1-205ENST00000517570 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms