RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A6NDN8 102 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TMEM262E9PQX1 116 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 FXYD2P54710 66 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 NANOS2P60321 138 aaKnown RBP3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 DEFB121Q5J5C9 76 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 ZFAND6Q6FIF0 208 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SCGB1D4Q6XE38 83 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LURAP1LQ8IV03 231 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 C10orf126Q8N4M7 172 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 COX11Q9Y6N1 276 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A087WZ39 114 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 DEFB131BA0A096LNP1 70 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 A0A0J9YXY3 114 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 A0A1B0GWB2 263 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 K7EP13 123 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 NDUFA1O15239 70 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGHV3-30P01768 117 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGHV3-30-5P0DP03 117 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 GCSHP23434 173 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 LINC01561Q8N1V8 128 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 Q8N3U1 123 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 LITAFQ99732 161 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 NDUFA12Q9UI09 145 aa3.71□□□□□ -1.82
SCARNA20.4-201ENST00000516969 TIMM17BO60830 172 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SS18Q15532 418 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 ESRGQ1W209 222 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 Q6ZVH6 145 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 LINC00269Q8N2A0 174 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 MRAPQ8TCY5 172 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 ZNF625Q96I27 306 aaPredicted RBP3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
SCARNA20.4-201ENST00000516969 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 TRAV10A0A0B4J240 114 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGKV3OR2-268A0A0C4DH90 116 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 ANGP03950 147 aaKnown RBP3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SMIM13P0DJ93 91 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 PTTG1IPP53801 180 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 REG3AQ06141 175 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 B9D2Q9BPU9 175 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SPANXDQ9BXN6 97 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SPANXCQ9NY87 97 aa3.69□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CFC1P0CG37 223 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 XCL1P47992 114 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 HERV-K104P63124 156 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 FOXI1Q12951 378 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 KRTAP21-3Q3LHN1 58 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 ENHOQ6UWT2 76 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 C15orf53Q8NAA6 179 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 COX7B2Q8TF08 81 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 Q9H8V8 135 aa3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 NHP2Q9NX24 153 aaKnown RBP3.68□□□□□ -1.82
SCARNA20.4-201ENST00000516969 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 TMEM238LA0A1B0GVL6 79 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 A6NJY4 79 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 K7ERJ3 54 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IFITM1P13164 125 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 RPL24P83731 157 aaKnown RBP3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 MIAQ16674 131 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 LINC01556Q5JQF7 62 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 WFDC10BQ8IUB3 73 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 MUSTN1Q8IVN3 82 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 PPDPFQ9H3Y8 114 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
SCARNA20.4-201ENST00000516969 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 A0A1W2PPM0 123 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 A4D1N5 150 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGLL5B9A064 214 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 H3BUT2 72 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 COX7A2LO14548 114 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 EIF4EBP3O60516 100 aaPredicted RBP3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 NHLRC4P0CG21 123 aaPredicted RBP3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 DNAH10OSP0CZ25 163 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 UBE2V1Q13404 147 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 KRTAP26-1Q6PEX3 210 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 Q8IZM0 81 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
SCARNA20.4-201ENST00000516969 DNAH7Q8WXX0 4024 aa3.65□□□□□ -1.82
SCARNA20.4-201ENST00000516969 IGLV10-54A0A075B6I4 117 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 A0A0B4J2C4 111 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
SCARNA20.4-201ENST00000516969 IBA57-AS1B1ANH7 110 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms