RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 BAALCQ8WXS3 180 aa6.81□□□□□ -1.32
NEDD9-214ENST00000513989 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-214ENST00000513989 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
NEDD9-214ENST00000513989 IGLV10-54A0A075B6I4 117 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 PRSS29PA6NIE9 313 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 XCL1P47992 114 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
NEDD9-214ENST00000513989 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
NEDD9-214ENST00000513989 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
NEDD9-214ENST00000513989 UBE2D1P51668 147 aa6.79□□□□□ -1.32
NEDD9-214ENST00000513989 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
NEDD9-214ENST00000513989 FAM104AQ969W3 186 aa6.79□□□□□ -1.32
NEDD9-214ENST00000513989 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
NEDD9-214ENST00000513989 TINCRA0A1B0GVN0 87 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 H0Y8G0 127 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 COX7A2LO14548 114 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 EREGO14944 169 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 RTL8CO15255 209 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 MALP21145 153 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 AKR1D1P51857 326 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 HERVK_113P63121 156 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 ZC2HC1BQ5TFG8 222 aa6.78□□□□□ -1.32
NEDD9-214ENST00000513989 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
NEDD9-214ENST00000513989 H3BRM9 83 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 APOMO95445 188 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 PET117Q6UWS5 81 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 FAM19A3Q7Z5A8 133 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
NEDD9-214ENST00000513989 A0A0J9YXV3 536 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 C20orf202A1L168 122 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 KRTDAPP60985 99 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 C14orf177Q52M58 125 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 LINC00336Q6ZUF6 198 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 HIST1H2BLQ99880 126 aa6.76□□□□□ -1.33
NEDD9-214ENST00000513989 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 F8VRH5 84 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 PLNP26678 52 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 FOXI1Q12951 378 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 LINC01561Q8N1V8 128 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 LINC00469Q8N7U9 141 aa6.75□□□□□ -1.33
NEDD9-214ENST00000513989 HSPG2P98160 4391 aa6.74□□□□□ -1.33
NEDD9-214ENST00000513989 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
NEDD9-214ENST00000513989 DPM2O94777 84 aa6.74□□□□□ -1.33
NEDD9-214ENST00000513989 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
NEDD9-214ENST00000513989 COX6A2Q02221 97 aa6.74□□□□□ -1.33
NEDD9-214ENST00000513989 Q6ZRN7 208 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-214ENST00000513989 MRPL35Q9NZE8 188 aaKnown RBP6.74□□□□□ -1.33
NEDD9-214ENST00000513989 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 A0A087WZ39 114 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 ODF1Q14990 250 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 TMEM170BQ5T4T1 132 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 CHAC1Q9BUX1 264 aa6.73□□□□□ -1.33
NEDD9-214ENST00000513989 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
NEDD9-214ENST00000513989 IGKCP01834 107 aa6.72□□□□□ -1.33
NEDD9-214ENST00000513989 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
NEDD9-214ENST00000513989 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.33
NEDD9-214ENST00000513989 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 A0A087WTM6 91 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 PRSS2P07478 247 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 HERVK_113P61574 105 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 LINC01545Q5VT33 79 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 OR10D4PQ8NGN7 298 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
NEDD9-214ENST00000513989 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 hDV102S1A0JD36 115 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 F8WDY8 70 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 LECT2O14960 151 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-214ENST00000513989 ORAOV1Q8WV07 137 aa6.7□□□□□ -1.34
NEDD9-214ENST00000513989 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
NEDD9-214ENST00000513989 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-214ENST00000513989 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
NEDD9-214ENST00000513989 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-214ENST00000513989 TNP2Q05952 138 aa6.69□□□□□ -1.34
NEDD9-214ENST00000513989 PMCHL2Q9BQD1 86 aa6.69□□□□□ -1.34
NEDD9-214ENST00000513989 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
NEDD9-214ENST00000513989 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-214ENST00000513989 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 CKS1BP61024 79 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 Q8N814 137 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 C2orf48Q96LS8 159 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
NEDD9-214ENST00000513989 TMEM223A0PJW6 202 aa6.67□□□□□ -1.34
NEDD9-214ENST00000513989 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms