RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 KANTRA0A1W2PQU2 76 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 FAM223BA6NKX1 122 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 C10orf142B7Z368 130 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 MGPP08493 103 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 HMGN3Q15651 99 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 LOC285556D6RIA3 1793 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 SIPA1L3O60292 1781 aaPredicted RBP1.45□□□□□ -2.18
CAST-229ENST00000510098 ARHGEF5Q12774 1597 aa1.45□□□□□ -2.18
CAST-229ENST00000510098 RGPD3A6NKT7 1758 aaPredicted RBP1.44□□□□□ -2.18
CAST-229ENST00000510098 F2Z2F3 143 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 ACYP1P07311 99 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 ZNF137PP52743 207 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 NMSQ5H8A3 153 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 KIF14Q15058 1648 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 EFCAB5A4FU69 1503 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 UGGT2Q9NYU1 1516 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 CCDC141Q6ZP82 1450 aa1.44□□□□□ -2.18
CAST-229ENST00000510098 GNGT1P63211 74 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 WFDC2Q14508 124 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 CFAP126Q5VTH2 177 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 SMIM11BQ8TCY0 68 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 LINC01600Q96MT4 127 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 PLXNC1O60486 1568 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 ASXL1Q8IXJ9 1541 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 FANCD2Q9BXW9 1451 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 TECTAO75443 2155 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 MYO3AQ8NEV4 1616 aa1.43□□□□□ -2.18
CAST-229ENST00000510098 C7orf77A4D0Y5 90 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 F8WEM9 126 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 M0R3E3 92 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 HMGN2P05204 90 aaKnown RBP1.42□□□□□ -2.18
CAST-229ENST00000510098 LINC00643Q86TS7 51 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 CDK13Q14004 1512 aaKnown RBP1.42□□□□□ -2.18
CAST-229ENST00000510098 MED13LQ71F56 2210 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 SUPT6HQ7KZ85 1726 aaKnown RBP1.42□□□□□ -2.18
CAST-229ENST00000510098 KIF21AQ7Z4S6 1674 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 MAP3K4Q9Y6R4 1608 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 KIAA0586Q9BVV6 1533 aa1.42□□□□□ -2.18
CAST-229ENST00000510098 CFAP43Q8NDM7 1665 aa1.41□□□□□ -2.18
CAST-229ENST00000510098 BIVM-ERCC5R4GMW8 1640 aa1.41□□□□□ -2.18
CAST-229ENST00000510098 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
CAST-229ENST00000510098 MAGI3Q5TCQ9 1506 aa1.41□□□□□ -2.18
CAST-229ENST00000510098 NCOA6Q14686 2063 aaPredicted RBP1.41□□□□□ -2.18
CAST-229ENST00000510098 GVQW2A0A096LPI5 108 aaPredicted RBP1.4□□□□□ -2.18
CAST-229ENST00000510098 LY6G6CO95867 125 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 ARMS2P0C7Q2 107 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.18
CAST-229ENST00000510098 Q6ZRX8 168 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 SPRR4Q96PI1 79 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 LINC00846Q9NV44 126 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 PSENENQ9NZ42 101 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 ABCA1O95477 2261 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 CFAP74Q9C0B2 1584 aa1.4□□□□□ -2.18
CAST-229ENST00000510098 IFT172Q9UG01 1749 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 EFCAB6Q5THR3 1501 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 TMEM131LA2VDJ0 1609 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 LAMC1P11047 1609 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 CLTCL1P53675 1640 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 PRB1P04280 392 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 IGLC2P0DOY2 106 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 IGLC3P0DOY3 106 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 GCHFRP30047 84 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 FXYD6P3P58550 94 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 BVES-AS1Q5T3Y7 98 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 SMCO4Q9NRQ5 59 aa1.4□□□□□ -2.19
CAST-229ENST00000510098 FLG2Q5D862 2391 aaPredicted RBP1.39□□□□□ -2.19
CAST-229ENST00000510098 PDCD11Q14690 1871 aaKnown RBP1.39□□□□□ -2.19
CAST-229ENST00000510098 KIF1AQ12756 1690 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 GCC2Q8IWJ2 1684 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 DIP2BQ9P265 1576 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 D6R8Y8 96 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 LEPROTL1O95214 131 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 MUSTN1Q8IVN3 82 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
CAST-229ENST00000510098 NEXMIFQ5QGS0 1516 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.38□□□□□ -2.19
CAST-229ENST00000510098 INO80Q9ULG1 1556 aaPredicted RBP1.38□□□□□ -2.19
CAST-229ENST00000510098 MAP2P11137 1827 aaKnown RBP1.38□□□□□ -2.19
CAST-229ENST00000510098 ANKARQ7Z5J8 1434 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 SCN7AQ01118 1682 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 SMIM31A0A1B0GVY4 71 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 IQCF6A8MYZ5 107 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 H3BUT2 72 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
CAST-229ENST00000510098 TMEM263Q8WUH6 116 aaKnown RBP1.38□□□□□ -2.19
CAST-229ENST00000510098 KCPQ6ZWJ8 1503 aa1.38□□□□□ -2.19
CAST-229ENST00000510098 RAPGEF6Q8TEU7 1601 aa1.37□□□□□ -2.19
CAST-229ENST00000510098 BTAF1O14981 1849 aa1.37□□□□□ -2.19
CAST-229ENST00000510098 ADAMTS12P58397 1594 aa1.37□□□□□ -2.19
CAST-229ENST00000510098 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CAST-229ENST00000510098 URB2Q14146 1524 aaKnown RBP1.37□□□□□ -2.19
CAST-229ENST00000510098 EIF2AK4Q9P2K8 1649 aaKnown RBP1.37□□□□□ -2.19
CAST-229ENST00000510098 A0A087WVE0 104 aa1.37□□□□□ -2.19
CAST-229ENST00000510098 MYMXA0A1B0GTQ4 84 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms