RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 C2orf48Q96LS8 159 aa3.59□□□□□ -1.83
PHF3-210ENST00000509876 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
PHF3-210ENST00000509876 SPANXDQ9BXN6 97 aa3.59□□□□□ -1.83
PHF3-210ENST00000509876 K7ERU9 68 aa3.59□□□□□ -1.83
PHF3-210ENST00000509876 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
PHF3-210ENST00000509876 JMJD1CQ15652 2540 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 M0R378 163 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 INAFM2P0DMQ5 153 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 CFC1BP0CG36 223 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 CFC1P0CG37 223 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 PCP2Q8IVA1 136 aa3.59□□□□□ -1.84
PHF3-210ENST00000509876 PYY3Q5JQD4 70 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 LINC01561Q8N1V8 128 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 IGLV4-60A0A075B6I1 120 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 A4D1N5 150 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 CYSRT1A8MQ03 144 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 XAGE1AQ9HD64 81 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 LINC00588Q9Y4M8 146 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
PHF3-210ENST00000509876 POLQO75417 2590 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 LAMA3Q16787 3333 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 LOC105371267A0A1B0GV96 52 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 NUPR1O60356 82 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 CR1P17927 2039 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 A8MTW9 85 aa3.58□□□□□ -1.84
PHF3-210ENST00000509876 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
PHF3-210ENST00000509876 NTN5Q8WTR8 489 aaPredicted RBP3.58□□□□□ -1.84
PHF3-210ENST00000509876 M0QXV9 152 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 LINC00315P59091 139 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 C9JAW5 83 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 KRTAP21-3Q3LHN1 58 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 C16orf90A8MZG2 172 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 HIGD1BQ9P298 99 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 USP9YO00507 2555 aaPredicted RBP3.57□□□□□ -1.84
PHF3-210ENST00000509876 USP9XQ93008 2570 aaPredicted RBP3.57□□□□□ -1.84
PHF3-210ENST00000509876 BRCA2P51587 3418 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 WIPF1O43516 503 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 ANKRD39Q53RE8 183 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 GAGE2AQ6NT46 116 aa3.57□□□□□ -1.84
PHF3-210ENST00000509876 FAM229AH3BQW9 127 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 HELZ2Q9BYK8 2649 aaKnown RBP3.56□□□□□ -1.84
PHF3-210ENST00000509876 DLEU1O43261 78 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 LINC00242Q5T6M2 205 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 TIMM17BO60830 172 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 LINC00336Q6ZUF6 198 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 TRAV23DV6A0A075B6W5 121 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 IGIPA6NJ69 53 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 NAA38Q9BRA0 125 aaKnown RBP3.56□□□□□ -1.84
PHF3-210ENST00000509876 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 IGKV2D-26A0A0A0MRZ7 120 aa3.56□□□□□ -1.84
PHF3-210ENST00000509876 IGKV2-28A0A075B6P5 120 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 IGKV2D-28P01615 120 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 MYO9AB2RTY4 2548 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 RTL8CO15255 209 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 UNQ6190/PRO20217Q6UXQ8 127 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 hADV29S1A0JD25 119 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 C9orf118A6NHY6 69 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 LINC00308Q8TCZ7 52 aa3.55□□□□□ -1.84
PHF3-210ENST00000509876 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 K7ERJ3 54 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 NDUFB1O75438 58 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 AMELXQ99217 191 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 BAALC-AS2P0C853 105 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 COX6A2Q02221 97 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 OCIAD2Q56VL3 154 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 C1orf137Q5JT78 98 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 UBL5Q9BZL1 73 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 DSCAML1Q8TD84 2053 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 NACAE9PAV3 2078 aa3.54□□□□□ -1.84
PHF3-210ENST00000509876 SORL1Q92673 2214 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 SMIM1B2RUZ4 78 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 APLNQ9ULZ1 77 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 TLN2Q9Y4G6 2542 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 PLA2G1BP04054 148 aaKnown RBP3.53□□□□□ -1.84
PHF3-210ENST00000509876 TMEM256-PLSCR3K7ERE1 68 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
PHF3-210ENST00000509876 ANKRD29Q8N6D5 301 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 A0A0B4J2C4 111 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 A0A1B0GV90 55 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 TRACP01848 142 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 AKAP13Q12802 2813 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 ACANP16112 2415 aa3.53□□□□□ -1.84
PHF3-210ENST00000509876 FLNBO75369 2602 aaKnown RBP3.53□□□□□ -1.84
PHF3-210ENST00000509876 YPEL4Q96NS1 127 aa3.53□□□□□ -1.85
PHF3-210ENST00000509876 TTTY13Q9BZ97 58 aa3.53□□□□□ -1.85
PHF3-210ENST00000509876 HIST1H4AP62805 103 aaKnown RBP3.52□□□□□ -1.85
PHF3-210ENST00000509876 CASC10Q5T4H9 136 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms