RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SPRR3Q9UBC9 169 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 IGKV2-40A0A087WW87 121 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 TMEM256-PLSCR3K7ERE1 68 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 IGKV2D-40P01614 121 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 BLCAPP62952 87 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 Q8TAT8 98 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 NDUFB1O75438 58 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 FXYD7P58549 80 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 KLK5Q9Y337 293 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 IGLV4-69A0A075B6H9 119 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 LINC00205P59089 165 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 PMAIP1Q13794 54 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 ESRGQ1W209 222 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 BEAN1Q3B7T3 259 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 ITLN2Q8WWU7 325 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 CELA1Q9UNI1 258 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 GATA1P15976 413 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 Q6ZRU5 148 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 LINC01561Q8N1V8 128 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 UPK3BQ9BT76 320 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 SPRY3O43610 288 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV3-48P01763 117 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 CTSGP08311 255 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 PKIGQ9Y2B9 76 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV7-4-1A0A0J9YVY3 117 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 CCKP06307 115 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 Q6ZS46 218 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV1-46P01743 117 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 EGFEM1PQ0D2K5 195 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 LYPD5Q6UWN5 251 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 ZFAND2AQ8N6M9 145 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 USMG5Q96IX5 58 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 C8orf49Q96NF6 230 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 IGLV4-3A0A075B6K6 122 aa2.03□□□□□ -2.08
NEDD4-204ENST00000503468 CEMP1Q6PRD7 247 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-204ENST00000503468 A0A087WWL8 130 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 IBA57-AS1B1ANH7 110 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 KLLNB2CW77 178 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 M0R1B8 84 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 UBE2L6O14933 153 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 VPREB1P12018 145 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 CCL3L1P16619 93 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 CD164L2Q6UWJ8 174 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 VMO1Q7Z5L0 202 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 C3orf56Q8N813 242 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 BRK1Q8WUW1 75 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 LEAP2Q969E1 77 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.09
NEDD4-204ENST00000503468 FAT1Q14517 4588 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 IGLV5-39A0A0G2JS06 123 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 TMEM178BH3BS89 294 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 BUB1B-PAK6H3BSN5 160 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 NDUFA4O00483 81 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 CXCL6P80162 114 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 C4orf26Q17RF5 130 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3-64DA0A0J9YX35 117 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 H7BZZ5 65 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 DAD1P61803 113 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 Q5XG85 94 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 FAM223BA6NKX1 122 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 TRGV3P03979 118 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 FAM223AQ8IWN6 122 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 RNASE6Q93091 150 aaKnown RBP2.02□□□□□ -2.09
NEDD4-204ENST00000503468 OBSCN-AS1Q96MR7 158 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 SVEP1Q4LDE5 3571 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 NDUFS5O43920 106 aa2.02□□□□□ -2.09
NEDD4-204ENST00000503468 SNRPD3P62318 126 aaKnown RBP2.02□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3OR16-10A0A075B7F0 116 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 H3BNG1 76 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 MIFP14174 115 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 MDFIQ99750 246 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 OPRPNQ99935 248 aaPredicted RBP2.01□□□□□ -2.09
NEDD4-204ENST00000503468 E7EUB6 86 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 RPL36AP83881 106 aaKnown RBP2.01□□□□□ -2.09
NEDD4-204ENST00000503468 CLEC2BQ92478 149 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 CCL17Q92583 94 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 RPL36ALQ969Q0 106 aaKnown RBP2.01□□□□□ -2.09
NEDD4-204ENST00000503468 LITAFQ99732 161 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 SND1-IT1Q9HBX3 110 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 M0QY20 66 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3-53P01767 116 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 TSPEAR-AS2P59090 65 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 C15orf32Q32M92 178 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 DEFB123Q8N688 67 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV1OR15-1A0A075B7D0 117 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 IGKV3D-7A0A0C4DH55 119 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 RNF223E7ERA6 249 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 CSNK1G2-AS1Q8NCQ2 148 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 Q9H8V8 135 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 LINC00846Q9NV44 126 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 349.9 ms