RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 C7orf77A4D0Y5 90 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 FAM223BA6NKX1 122 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 C10orf142B7Z368 130 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 ACYP1P07311 99 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 GCHFRP30047 84 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 RPL37P61927 97 aaKnown RBP0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 Q6ZRX8 168 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 Q6ZSA8 131 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 ST20Q9HBF5 79 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 LINC00846Q9NV44 126 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 PI4KAP42356 2102 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 RRBP1Q9P2E9 1410 aaKnown RBP0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 ABCC2Q92887 1545 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 RP1L1Q8IWN7 2480 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 TMEM131LA2VDJ0 1609 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 KIF14Q15058 1648 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 M0R3E3 92 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 PIN1P1O15428 100 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 LY6G6CO95867 125 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 ARMS2P0C7Q2 107 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 ARL14EPLP0DKL9 152 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 ETDBQ3ZM63 59 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 NMSQ5H8A3 153 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 LINC01600Q96MT4 127 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 PRR15LQ9BU68 103 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 SPCS1Q9Y6A9 102 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 CACNA1BQ00975 2339 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 NRXN1Q9ULB1 1477 aa0.79□□□□□ -2.28
HMGB1P35-201ENST00000503360 HELZ2Q9BYK8 2649 aaKnown RBP0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 DOCK11Q5JSL3 2073 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 F8WEM9 126 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 K7EIL1 84 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 HMGN2P05204 90 aaKnown RBP0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 WFDC2Q14508 124 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 LINC00643Q86TS7 51 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 TMEM263Q8WUH6 116 aaKnown RBP0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 PROK2Q9HC23 129 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 PSENENQ9NZ42 101 aa0.78□□□□□ -2.28
HMGB1P35-201ENST00000503360 ABCA8O94911 1581 aa0.78□□□□□ -2.29
HMGB1P35-201ENST00000503360 CFAP74Q9C0B2 1584 aa0.78□□□□□ -2.29
HMGB1P35-201ENST00000503360 PPRC1Q5VV67 1664 aaKnown RBP0.78□□□□□ -2.29
HMGB1P35-201ENST00000503360 KIF20BQ96Q89 1820 aa0.78□□□□□ -2.29
HMGB1P35-201ENST00000503360 D6R8Y8 96 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 LEPROTL1O95214 131 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 SPINT3P49223 89 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 MUSTN1Q8IVN3 82 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 LINC00472Q9H8W2 130 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 RAPGEF6Q8TEU7 1601 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 KIF21AQ7Z4S6 1674 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 MED13LQ71F56 2210 aa0.77□□□□□ -2.29
HMGB1P35-201ENST00000503360 FLG2Q5D862 2391 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 NUP188Q5SRE5 1749 aa0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 IFT172Q9UG01 1749 aa0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 G3V318 75 aa0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 S100A3P33764 101 aa0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 SPINK9Q5DT21 86 aa0.76□□□□□ -2.29
HMGB1P35-201ENST00000503360 LRRC37A2A6NM11 1700 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 PTPN23Q9H3S7 1636 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 ADAMTS12P58397 1594 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 KNTC1P50748 2209 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 MYMXA0A1B0GTQ4 84 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 IQCF6A8MYZ5 107 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 Q6JHZ5 121 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 MYO7BQ6PIF6 2116 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 ZFHX3Q15911 3703 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 MYH4Q9Y623 1939 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 PDCD11Q14690 1871 aaKnown RBP0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 ZNF236Q9UL36 1845 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 SUPT6HQ7KZ85 1726 aaKnown RBP0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 NHSL1Q5SYE7 1610 aa0.75□□□□□ -2.29
HMGB1P35-201ENST00000503360 SSC5DA1L4H1 1573 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 NCOA2Q15596 1464 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 BTAF1O14981 1849 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 A0A087WVE0 104 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 IGLC2P0DOY2 106 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 IGLC3P0DOY3 106 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 HAMPP81172 84 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 PLGLAQ15195 96 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 BVES-AS1Q5T3Y7 98 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 C10orf113Q5VZT2 155 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 UBE2DNLQ8IWF7 75 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 FDCSPQ8NFU4 85 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 SMCO4Q9NRQ5 59 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 KDM3BQ7LBC6 1761 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 ABCA1O95477 2261 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 KMT2BQ9UMN6 2715 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 IQGAP3Q86VI3 1631 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 ALKQ9UM73 1620 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 CUX1P39880 1505 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 NEXMIFQ5QGS0 1516 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 ERICH3Q5RHP9 1530 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 KCPQ6ZWJ8 1503 aa0.74□□□□□ -2.29
HMGB1P35-201ENST00000503360 CCDC141Q6ZP82 1450 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 LRRC9Q6ZRR7 1453 aa0.73□□□□□ -2.29
HMGB1P35-201ENST00000503360 LTN1O94822 1766 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms