RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ATP5J2P56134 94 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 LRRC75A-AS1Q8N1F1 130 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 RAB37Q96AX2 223 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 MRPL16Q9NX20 251 aaKnown RBP3.14□□□□□ -1.91
SSR3-209ENST00000498205 SPANXCQ9NY87 97 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 PRO1854Q9UHT4 67 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 VPREB3Q9UKI3 123 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 SORL1Q92673 2214 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3OR16-13A0A075B7E8 117 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-74A0A0B4J1X5 117 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 K7ERJ3 54 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 M0R2P5 195 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 GNRH2O43555 120 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 APOMO95445 188 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 TSPAN13O95857 204 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-53P01767 116 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 MGPP08493 103 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 ZNF22P17026 224 aaPredicted RBP3.13□□□□□ -1.91
SSR3-209ENST00000498205 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
SSR3-209ENST00000498205 BLCAPP62952 87 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 WFDC2Q14508 124 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 MRPL23Q16540 153 aaKnown RBP3.13□□□□□ -1.91
SSR3-209ENST00000498205 ETDBQ3ZM63 59 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 ZNRF2Q8NHG8 242 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 TTTY13Q9BZ97 58 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 TEP1Q99973 2627 aaKnown RBP3.13□□□□□ -1.91
SSR3-209ENST00000498205 TLN2Q9Y4G6 2542 aa3.13□□□□□ -1.91
SSR3-209ENST00000498205 TRAV26-1A0A087WT03 109 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-49A0A0A0MS15 119 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 IGHV1-58A0A0C4DH39 117 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 H3BT86 120 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 C19orf84I3L1E1 186 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
SSR3-209ENST00000498205 ZFAND6Q6FIF0 208 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 Q6Q795 121 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 BRD3OSQ6XYD6 125 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 Q6ZQT7 251 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 TMEM263Q8WUH6 116 aaKnown RBP3.12□□□□□ -1.91
SSR3-209ENST00000498205 YAE1D1Q9NRH1 226 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 TSSC4Q9Y5U2 329 aaPredicted RBP3.12□□□□□ -1.91
SSR3-209ENST00000498205 DCHS1Q96JQ0 3298 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 ZFYVE26Q68DK2 2539 aa3.12□□□□□ -1.91
SSR3-209ENST00000498205 ABCA12Q86UK0 2595 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 HIVEP2P31629 2446 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 UBR5O95071 2799 aaPredicted RBP3.11□□□□□ -1.91
SSR3-209ENST00000498205 FASNP49327 2511 aaKnown RBP3.11□□□□□ -1.91
SSR3-209ENST00000498205 TRAV4A0A0B4J268 109 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 TRAV12-3A0A0B4J271 114 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 F6UB75 175 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 H3BMM0 161 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 ZNF861PO60384 105 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-11P01762 117 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 PRB2P02812 416 aaPredicted RBP3.11□□□□□ -1.91
SSR3-209ENST00000498205 COX6CP09669 75 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 ATXN8Q156A1 80 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 DEFB121Q5J5C9 76 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 TMEM170BQ5T4T1 132 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 ZNF418Q8TF45 676 aaPredicted RBP3.11□□□□□ -1.91
SSR3-209ENST00000498205 C4orf3Q8WVX3 66 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 CARD19Q96LW7 228 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 ERG28Q9UKR5 140 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 NACAE9PAV3 2078 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 C2CD3Q4AC94 2353 aa3.11□□□□□ -1.91
SSR3-209ENST00000498205 RELNP78509 3460 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 CENPEQ02224 2701 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 TRBV10-2A0A0K0K1G8 114 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 NDUFA1O15239 70 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 RS1O15537 224 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 TCL1BO95988 128 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 ZNF688P0C7X2 276 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 SCGB1C2P0DMR2 95 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3-30-3P0DP02 117 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 TSPEAR-AS2P59090 65 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 RPL39P62891 51 aaKnown RBP3.1□□□□□ -1.91
SSR3-209ENST00000498205 HERVK_113P63121 156 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 ZNF56Q15929 161 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 MIAQ16674 131 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 C11orf72Q8NBR9 251 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 FAM104AQ969W3 186 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 NAA38Q9BRA0 125 aaKnown RBP3.1□□□□□ -1.91
SSR3-209ENST00000498205 LINC00527Q9UJ94 153 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 UBE2D4Q9Y2X8 147 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 POLQO75417 2590 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 EPG5Q9HCE0 2579 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 USP24Q9UPU5 2620 aa3.1□□□□□ -1.91
SSR3-209ENST00000498205 MXRA5Q9NR99 2828 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 SLC25A20O43772 301 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 INSP01308 110 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 ACYP1P07311 99 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 EGFEM1PQ0D2K5 195 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 DAZ2Q13117 558 aaKnown RBP3.09□□□□□ -1.91
SSR3-209ENST00000498205 CIRBPQ14011 172 aaKnown RBP3.09□□□□□ -1.91
SSR3-209ENST00000498205 LY6EQ16553 131 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 DEFB112Q30KQ8 113 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 LINC01620Q4KN68 170 aa3.09□□□□□ -1.91
SSR3-209ENST00000498205 FAM222AQ5U5X8 452 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms