RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
SPTBN1-205ENST00000496323 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
SPTBN1-205ENST00000496323 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
SPTBN1-205ENST00000496323 DEFB121Q5J5C9 76 aa9.42□□□□□ -0.9
SPTBN1-205ENST00000496323 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 Q8N3U1 123 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
SPTBN1-205ENST00000496323 A6NDN8 102 aa9.4□□□□□ -0.9
SPTBN1-205ENST00000496323 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
SPTBN1-205ENST00000496323 ZFAND6Q6FIF0 208 aa9.4□□□□□ -0.91
SPTBN1-205ENST00000496323 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.91
SPTBN1-205ENST00000496323 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.91
SPTBN1-205ENST00000496323 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 LINC00959A0A1B0GUT2 108 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 H3BNG1 76 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 LELP1Q5T871 98 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 SPANXB1Q9NS25 103 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 PTTG1IPP53801 180 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
SPTBN1-205ENST00000496323 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
SPTBN1-205ENST00000496323 K7ERJ3 54 aa9.38□□□□□ -0.91
SPTBN1-205ENST00000496323 SRSF9Q13242 221 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTBN1-205ENST00000496323 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
SPTBN1-205ENST00000496323 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
SPTBN1-205ENST00000496323 CLPSL2Q6UWE3 100 aa9.37□□□□□ -0.91
SPTBN1-205ENST00000496323 LITAFQ99732 161 aa9.37□□□□□ -0.91
SPTBN1-205ENST00000496323 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-205ENST00000496323 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
SPTBN1-205ENST00000496323 LINC00269Q8N2A0 174 aa9.36□□□□□ -0.91
SPTBN1-205ENST00000496323 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
SPTBN1-205ENST00000496323 NDUFA1O15239 70 aa9.36□□□□□ -0.91
SPTBN1-205ENST00000496323 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
SPTBN1-205ENST00000496323 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
SPTBN1-205ENST00000496323 ADAMTSL4-AS1Q5T5F5 129 aa9.35□□□□□ -0.91
SPTBN1-205ENST00000496323 A0A087WZ39 114 aa9.34□□□□□ -0.91
SPTBN1-205ENST00000496323 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
SPTBN1-205ENST00000496323 CCL25O15444 150 aa9.34□□□□□ -0.91
SPTBN1-205ENST00000496323 ANGP03950 147 aaKnown RBP9.34□□□□□ -0.91
SPTBN1-205ENST00000496323 XCL1P47992 114 aa9.34□□□□□ -0.91
SPTBN1-205ENST00000496323 C9orf118A6NHY6 69 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 Q9H8V8 135 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 REG3AQ06141 175 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 SS18Q15532 418 aa9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 ZNF625Q96I27 306 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-205ENST00000496323 ESRGQ1W209 222 aa9.32□□□□□ -0.92
SPTBN1-205ENST00000496323 H3BUT2 72 aa9.31□□□□□ -0.92
SPTBN1-205ENST00000496323 MUSTN1Q8IVN3 82 aa9.31□□□□□ -0.92
SPTBN1-205ENST00000496323 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
SPTBN1-205ENST00000496323 COX7B2Q8TF08 81 aa9.3□□□□□ -0.92
SPTBN1-205ENST00000496323 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
SPTBN1-205ENST00000496323 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
SPTBN1-205ENST00000496323 IGLV10-54A0A075B6I4 117 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 A6NJY4 79 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 TIMM17BO60830 172 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 VAMP3Q15836 100 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 CHCHD10Q8WYQ3 142 aaPredicted RBP9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 TRAV10A0A0B4J240 114 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 CD164L2Q6UWJ8 174 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
SPTBN1-205ENST00000496323 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 MIAQ16674 131 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 ENHOQ6UWT2 76 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 A4D1N5 150 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 IGLL5B9A064 214 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 PRSS2P07478 247 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 CFC1P0CG37 223 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 DAND5Q8N907 189 aa9.28□□□□□ -0.92
SPTBN1-205ENST00000496323 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
SPTBN1-205ENST00000496323 APOMO95445 188 aa9.27□□□□□ -0.93
SPTBN1-205ENST00000496323 HERV-K104P63124 156 aa9.27□□□□□ -0.93
SPTBN1-205ENST00000496323 FOXI1Q12951 378 aa9.27□□□□□ -0.93
SPTBN1-205ENST00000496323 UBE2V1Q13404 147 aa9.27□□□□□ -0.93
SPTBN1-205ENST00000496323 RPL24P83731 157 aaKnown RBP9.26□□□□□ -0.93
SPTBN1-205ENST00000496323 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
SPTBN1-205ENST00000496323 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
SPTBN1-205ENST00000496323 NPC2P61916 151 aa9.25□□□□□ -0.93
SPTBN1-205ENST00000496323 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
SPTBN1-205ENST00000496323 COX7A2LO14548 114 aa9.25□□□□□ -0.93
SPTBN1-205ENST00000496323 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-205ENST00000496323 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
SPTBN1-205ENST00000496323 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
SPTBN1-205ENST00000496323 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
SPTBN1-205ENST00000496323 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 Q8IZM0 81 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
SPTBN1-205ENST00000496323 IFITM1P13164 125 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms